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Genome Name Description Source Provenance Sequence Type Version Chr Count Length (bp) GC%
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AT% N% X% Feature Counts
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Amino Acid Usage
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CDS GC Histogram
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CDS Wobble GC Historgram
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Petromyzon marinus (lamprey) [id: 12390] Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia; Chordata; Craniata; Vertebrata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon Ensembl [id: 100] Petromyzon_marinus.Petromyzon_marinus_7.0.64.dna.toplevel.fa unmasked [id: 1]
Fasta
GFF File
7.0.64 25,005 885,534,757 55.74 44.26 0.00 0.00
Gadus morhua (Atlantic cod) [id: 14730] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; Acanthomorpha; Paracanthopterygii; Gadiformes; Gadidae; Gadus NCBI [id: 21] CAEA00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 6,467 611,230,789
Nothobranchius kuhntae (Beira killifish) [id: 15184] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; Acanthomorpha; Acanthopterygii; Percomorpha; Atherinomorpha; Cyprinodontiformes; Nothobranchiidae; Nothobranchius NCBI [id: 21] ACDA00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 5,934 5,234,607 34.38 65.62 0.00 0.00
Nothobranchius furzeri (turquoise killifish) strain GRZ [id: 15571] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; Acanthomorpha; Acanthopterygii; Percomorpha; Atherinomorpha; Cyprinodontiformes; Nothobranchiidae; Nothobranchius NCBI [id: 21] ABLO00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 5,299 5,316,924 61.21 38.79 0.00 0.00
Maylandia zebra (zebra mbuna) [id: 18029] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; Acanthomorpha; Acanthopterygii; Percomorpha; Perciformes; Labroidei; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex NCBI [id: 21] AGTA00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 2,416 875,688,584
Pundamilia nyererei [id: 18037] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; Acanthomorpha; Acanthopterygii; Percomorpha; Perciformes; Labroidei; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia NCBI [id: 21] AFNX00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 3,067 820,432,779
Lepisosteus oculatus (spotted gar) [id: 19548] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Semionotiformes; Lepisosteidae; Lepisosteus NCBI [id: 21] AHAT00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 29 891,144,077
Tetraodon nigroviridis (green-spotted freshwater pufferfish) [id: 23254] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; Acanthomorpha; Acanthopterygii; Percomorpha; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Tetraodon UCSC [id: 74] tetraodon.gtf
tetNig2-2.fa
unmasked [id: 1]
Fasta
GFF File
UCSC 27 358,618,246
Gasterosteus aculeatus aculeatus [id: 23854] gasterosteus; aculeatus UCSC [id: 74] Galaxy8-[UCSC_Main_on_Stickleback__ensGene_(genome)].gtf
whole.fa
unmasked [id: 1]
Fasta
GFF File
Workinganno 23 463,354,448
Sebastes nigrocinctus [id: 24332] Sebastes; nigrocinctus cnw [id: 945] nigroAP.fa.masked.masked
nigroAP.fa.masked.all.gff
nigroAP.fa.masked.all.gff
softmasked by RepeatMasker [id: 37]
Fasta
GFF File
whole genome 15,918 745,902,082
Sebastes aleutianus [id: 24460] Scorpaenidae; Sebastes; aleutianus USC [id: 1202] Aleut-allpaths-scaffolds.fasta unmasked [id: 1]
Fasta
GFF File
1 10,993 893,555,925
Oncorhynchus mykiss (Rainbow trout) [id: 24831] cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus; Oncorhynchus mykiss Genoscope [id: 55] Oncorhynchus_mykiss_scaffolds.fa unmasked [id: 1]
Fasta
GFF File
1 79,941 1,877,544,617
Poecilia reticulata (guppy) strain Guanapo [id: 24834] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia NCBI [id: 21] AZHG00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 23 696,700,953
Lethenteron camtschaticum (Lethenteron japonicum) [id: 24836] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Lethenteron NCBI [id: 21] APJL00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 6,011 887,131,771
Sebastes rubrivinctus (flag rockfish) [id: 24862] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Percomorpharia; Perciformes; Scorpaenoidei; Sebastidae; Sebastinae; Sebastes NCBI [id: 21] AUPQ01.fsa.1
Sebastes rubrivinctus scaffolds AUPQ01.fsa.2.txt
unmasked [id: 1]
Fasta
GFF File
2 136,109 749,515,015
Poecilia formosa (Amazon molly) [id: 24865] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia NCBI [id: 21] AYCK00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 1,878 738,654,027
Dicentrarchus labrax (European seabass) [id: 24873] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Moronidae; Dicentrarchus NCBI [id: 21] CABK00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 36,166 98,228,070 43.00 57.00 0.00 0.00
Anguilla japonica (Japanese eel) [id: 24876] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla NCBI [id: 21] Anguilla_japonica.fasta unmasked [id: 1]
Fasta
GFF File
1 87,544 1,034,548,885 40.86 55.96 3.18 0.00
Anoplopoma fimbria (sablefish) [id: 24878] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma NCBI [id: 21] AWGY00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 208,506 699,326,415 42.25 57.75 0.00 0.00
Danio rerio (zebrafish) strain Tuebingen [id: 24907] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio NCBI [id: 21] CM002889.gbk
CM002908.gbk
CM002904.gbk
CM002900.gbk
CM002899.gbk
CM002906.gbk
CM002907.gbk
CM002893.gbk
CM002897.gbk
CM002890.gbk
CM002909.gbk
CM002896.gbk
CM002903.gbk
CM002891.gbk
CM002892.gbk
CM002901.gbk
CM002895.gbk
CM002902.gbk
CM002886.gbk
CM002888.gbk
CM002894.gbk
CM002905.gbk
CM002885.gbk
CM002898.gbk
CM002887.gbk
unmasked [id: 1]
Fasta
GFF File
1 25 1,340,430,591
Cynoglossus semilaevis (tongue sole) [id: 24908] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus NCBI [id: 21] AGRG00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 22 445,139,357
Stegastes partitus (bicolor damselfish) [id: 24909] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes NCBI [id: 21] JMKM00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 3,117 787,721,431
Takifugu flavidus (sansaifugu) [id: 24910] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu NCBI [id: 21] AOOT00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 3,226 346,440,018 45.00 54.37 0.63 0.00
Cyprinodon variegatus [id: 24911] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon NCBI [id: 21] JPKM00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 4,300 1,026,462,161
Labeotropheus fuelleborni (blue mbuna) strain Domwe Island [id: 24912] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Labeotropheus NCBI [id: 21] ABPK00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 16,222 23,694,187
Melanochromis auratus strain Domwe Island [id: 24913] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Melanochromis NCBI [id: 21] ABPL00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 16,843 22,070,797 52.73 40.35 6.93 0.00
Mchenga conophoros (Copadichromis conophorus) strain Otter Point [id: 24914] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Mchenga NCBI [id: 21] ABPJ00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 17,486 26,154,870 51.95 40.34 7.72 0.00
Pimephales promelas (fathead minnow) [id: 24916] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Pimephales NCBI [id: 21] JNCD00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 73,057 1,219,326,373 34.95 65.05 0.00 0.00
Thunnus orientalis (Pacific bluefin tuna) [id: 24952] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Thunnus NCBI [id: 21] BADN00000000.gbk unmasked [id: 1]
Fasta
GFF File
1 133,062 684,497,465 42.98 57.02 0.00 0.00
Haplochromis burtoni (Burton's mouthbrooder) [id: 25002] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; Acanthomorpha; Acanthopterygii; Percomorpha; Perciformes; Labroidei; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis NCBI [id: 21] GCF_000239415.1_AstBur1.0_genomic.gff
GCF_000239415.1_AstBur1.0_genomic.fna
unmasked [id: 1]
Fasta
GFF File
1.0 8,001 831,411,547 38.72 56.52 4.77 0.00
Lateimeria chalumnae (coelacanth) FTP upload for annotation [id: 25005] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria NCBI [id: 21] GCF_000225785.1_LatCha1_genomic.fna
GCF_000225785.1_LatCha1_genomic.gff
unmasked [id: 1]
Fasta
GFF File
1.0 22,819 2,860,591,921
Neolamprologus brichardi (lyretail cichlid) FTP upload for annotation [id: 25006] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; Acanthomorpha; Acanthopterygii; Percomorpha; Perciformes; Labroidei; Cichlidae; African cichlids; Pseudocrenilabrinae; Lamprologini; Neolamprologus NCBI [id: 21] GCF_000239395.1_NeoBri1.0_genomic.gff
GCF_000239395.1_NeoBri1.0_genomic.fna
unmasked [id: 1]
Fasta
GFF File
1.0 9,099 847,910,432
Oreochromis niloticus (Nile tilapia) FTP upload for annotation [id: 25007] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; Acanthomorpha; Acanthopterygii; Percomorpha; Perciformes; Labroidei; Cichlidae; African cichlids; Pseudocrenilabrinae; Tilapiini; Oreochromis NCBI [id: 21] GCF_000188235.2_Orenil1.1_genomic.fna
GCF_000188235.2_Orenil1.1_genomic.gff
unmasked [id: 1]
Fasta
GFF File
1.1 5,678 927,696,114
Oryzias latipes (Japanese medaka) strain Hd-rR FTP upload for annotation [id: 25008] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; Acanthomorpha; Acanthopterygii; Percomorpha; Atherinomorpha; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias NCBI [id: 21] GCF_000313675.1_ASM31367v1_genomic.fna
GCF_000313675.1_ASM31367v1_genomic.gff
unmasked [id: 1]
Fasta
GFF File
1.0 7,189 869,818,208
Xiphophorus maculatus (southern platyfish) strain JP 163 A FTP upload for annotation [id: 25014] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei; Acanthomorpha; Acanthopterygii; Percomorpha; Atherinomorpha; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus NCBI [id: 21] GCF_000241075.1_Xiphophorus_maculatus-4.4.2_genomic.fna
GCF_000241075.1_Xiphophorus_maculatus-4.4.2_genomic.gff
unmasked [id: 1]
Fasta
GFF File
4.4.2 20,632 729,664,433
Callorhinchus milii (elephant shark) [id: 25133] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus NCBI [id: 21] GCF_000165045.1_Callorhinchus_milii-6.1.3_genomic.fna
GCF_000165045.1_Callorhinchus_milii-6.1.3_genomic.gff
unmasked [id: 1]
Fasta
GFF File
6.1.3 21,204 974,498,586
Astyanax mexicanus (Mexican tetra) [id: 25134] cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Otomorpha; Ostariophysi; Otophysa; Characiphysae; Characiformes; Characoidei; Characidae; Characidae incertae sedis; Astyanax clade; Astyanax NCBI [id: 21] GCF_000372685.1_Astyanax_mexicanus-1.0.2_genomic.fna
GCF_000372685.1_Astyanax_mexicanus-1.0.2_genomic.gff
unmasked [id: 1]
Fasta
GFF File
1.0.2 10,735 1,191,242,572 32.69 53.52 13.79 0.00
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Name Description Source Provenance Sequence Type Version Chromosome Count
Length GC% AT% N% X% Feature Counts
Amino Acid Usage Codon Usage CDS GC Histogram CDS Wobble GC Histogram