We have detected that your browser currently has JavaScript disabled. In order for CoGe to function properly JavaScript must be enabled in your browser.
Would you like to log out of all CyVerse applications?
Log out of CoGe only
Log out of all CyVerse services
CoGe
advanced
type:
any
experiment
feature
genome
notebook
organism
certified:
any
yes
no
feature type:
metadata key:
metadata value:
tag:
search
My Data
Tools
OrganismView
CoGeBlast
FeatView
SynFind
SynMap
SynMap3D
GEvo
Load Genome
LoadExp+
Taxonomy
Help
CoGePedia
Page Docs
Forums
FAQ
Tutorials
Cite CoGe
System Support
Log in
Organisms:
1
}
Vitis vinifera (grape) (id351)
Organism Information
Name:
Vitis vinifera (grape)
Description:
Eukaryota
;
Viridiplantae
;
Streptophyta
;
Embryophyta
;
Tracheophyta
;
Spermatophyta
;
Magnoliophyta
;
eudicotyledons
;
core eudicotyledons
;
Vitales
;
Vitaceae
;
Vitis
;
Tools:
OrganismView
 | 
CodeOn
Search:
 
 
Genomes:
9
Vitis vinifera (grape) (v12X.release-51, id62513): unmasked
Vitis vinifera (grape) (v12x, id19990): unmasked
Vitis vinifera (grape) (v12x, id61501): unmasked
Vitis vinifera (grape) (v12x, id19986): hardmasked by RepeatMasker
Vitis vinifera (grape) (v2, id9048): unmasked
Vitis vinifera (grape) (v2, id9050): masked by genoscope
Vitis vinifera (grape) (v1, id43): unmasked
Vitis vinifera (grape) (v1, id42): masked repeats 50x
Vitis vinifera (grape) (v-1, id41): masked repeats 50x
Genome Information
Genome ID:
9048
Sequence type:
unmasked: unmasked sequence data (gstid1)
Length:
486,198,630 bp
Tools:
GenomeInfo
 | 
OrganismView
 | 
CodeOn
 | 
SynMap
 | 
CoGeBlast
 | 
Add to GenomeList
Datasets:
1
chr.fa(v2, id43318)
Dataset Information
Name:
chr.fa
(id43318)
Source:
French National Sequence Center: Genoscope
(id56)
Version:
2
Organism:
Vitis vinifera (grape)
Created:
2010-04-08 11:50:04
Chromosomes:
33
Total length:
486,198,630 bp
Tools:
OrganismView
Chromosomes:
1 (23,037,639 bp)
1_random (568,933 bp)
2 (18,779,844 bp)
3 (19,341,862 bp)
3_random (1,220,746 bp)
4 (23,867,706 bp)
4_random (76,237 bp)
5 (25,021,643 bp)
5_random (421,237 bp)
6 (21,508,407 bp)
7 (21,026,613 bp)
7_random (1,447,032 bp)
8 (22,385,789 bp)
9 (23,006,712 bp)
9_random (487,831 bp)
10 (18,140,952 bp)
10_random (789,605 bp)
11 (19,818,926 bp)
11_random (282,498 bp)
12 (22,702,307 bp)
12_random (1,566,225 bp)
13 (24,396,255 bp)
13_random (3,268,264 bp)
14 (30,274,277 bp)
15 (20,304,914 bp)
16 (22,053,297 bp)
16_random (740,079 bp)
17 (17,126,926 bp)
17_random (829,735 bp)
18 (29,360,087 bp)
18_random (5,170,003 bp)
19 (24,021,853 bp)
Un (43,154,196 bp)
Chromosome Information
Chromosome ID:
1
Nucleotides:
23,037,639 bp
Launch Genome Viewer
Start:
Get Sequence
Start:
End:
Genomes:
0
Remove
Clear
Sort
No Genome Selected
Send to GenomeList
Do not generate features for ncRNA genes (CDS genes only)
Include feature annotations (descriptive text; Geneontology; etc)
Ensure that GFF Name tag is unique for each feature
Do not propagate duplicate annotations to children
For GFF "ID" and "Parent" tags, use unique:
Name
Number
Export GFF File