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Organisms:
1
}
Arabidopsis thaliana Col-0 (thale cress) (id1)
Organism Information
Name:
Arabidopsis thaliana Col-0 (thale cress)
Description:
Eukaryota
;
Viridiplantae
;
Streptophyta
;
Embryophyta
;
Tracheophyta
;
Spermatophyta
;
Magnoliophyta
;
eudicotyledons
;
core eudicotyledons
;
rosids
;
eurosids II
;
Brassicales
;
Brassicaceae
;
Arabidopsis
;
Tools:
OrganismView
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Search:
 
 
Genomes:
37
✅ Arabidopsis thaliana Col-0 (thale cress) (v10.02, id16911): unmasked
Arabidopsis thaliana Col-0 (thale cress) (vreference, id54585): unmasked
Arabidopsis thaliana Col-0 (thale cress) (voxford, id50976): unmasked
Arabidopsis thaliana Col-0 (thale cress) (v10_PHVmerged, id25778): masked repeats 50x
Arabidopsis thaliana Col-0 (thale cress) (v10_PHVmerged, id51788): NCBI WindowMasker (Hard)
Arabidopsis thaliana Col-0 (thale cress) (v10_PHV, id25725): masked repeats 50x
Arabidopsis thaliana Col-0 (thale cress) (v10_PHV, id26253): masked repeats 50x
Arabidopsis thaliana Col-0 (thale cress) (v10.29, id28111): unmasked
Arabidopsis thaliana Col-0 (thale cress) (v10.02, id20342): unmasked
Arabidopsis thaliana Col-0 (thale cress) (v10.02, id24424): unmasked
Arabidopsis thaliana Col-0 (thale cress) (v10.02, id24893): unmasked
Arabidopsis thaliana Col-0 (thale cress) (v10.02, id28570): unmasked
Arabidopsis thaliana Col-0 (thale cress) (v10.02, id51314): unmasked
Arabidopsis thaliana Col-0 (thale cress) (v10, id11022): unmasked
Arabidopsis thaliana Col-0 (thale cress) ( Arabidopsis thaliana Col-0 (thale cress) (Proofing Genome)) (v10, id19870): masked repeats 50x
Arabidopsis thaliana Col-0 (thale cress) ( Arabidopsis thaliana Col-0 (thale cress) (with CNS PL2.0) ) (v10, id16746): masked repeats 50x
Arabidopsis thaliana Col-0 (thale cress) (Arabidopsis thaliana v10, 50x masked): fasta file copied from 16746; gff copied from 11022 (v10, id24739): masked repeats 50x
Arabidopsis thaliana Col-0 (thale cress) (v10, id19865): NCBI WindowMasker (Hard)
Arabidopsis thaliana Col-0 (thale cress) ( Arabidopsis thaliana Col-0 (thale cress) (with CNS PL2.0) ) (v10, id19866): NCBI WindowMasker (Hard)
Arabidopsis thaliana Col-0 (thale cress) (v9, id7043): unmasked
Arabidopsis thaliana Col-0 (thale cress) (v9, id7054): unmasked
Arabidopsis thaliana Col-0 (thale cress) ( Arabidopsis thaliana Col-0 (thale cress) (with CNS PL2.0) ) (v9, id8084): masked repeats 50x
Arabidopsis thaliana Col-0 (thale cress) (v9, id8127): te+kmer masked
Arabidopsis thaliana Col-0 (thale cress) (v8, id8): unmasked
Arabidopsis thaliana Col-0 (thale cress) ( Arabidopsis thaliana Col-0 (thale cress) (with CNS PL2.0 and golden) ) (v8, id3): masked repeats 50x
Arabidopsis thaliana Col-0 (thale cress) ( Arabidopsis thaliana Col-0 (thale cress) (with CNS PL3.0 and golden) ): Copied from dataset_group id: 3 (v8, id19494): masked repeats 50x
Arabidopsis thaliana Col-0 (thale cress) ( Arabidopsis thaliana Col-0 (thale cress) (with CNS PL3.0 and golden) ) (v8, id19867): NCBI WindowMasker (Hard)
Arabidopsis thaliana Col-0 (thale cress) (v7, id7): unmasked
Arabidopsis thaliana Col-0 (thale cress) (v7, id2): masked repeats 50x
Arabidopsis thaliana Col-0 (thale cress) (v6, id1): unmasked
Arabidopsis thaliana Col-0 (thale cress) (v6, id6): unmasked
Arabidopsis thaliana Col-0 (thale cress) (v1, id33934): unmasked
Arabidopsis thaliana Col-0 (thale cress) (v1, id57725): NCBI WindowMasker (Hard)
Arabidopsis thaliana Col-0 (thale cress) (v1, id57733): NCBI WindowMasker (Hard)
Arabidopsis thaliana Col-0 (thale cress) (v1, id57736): NCBI WindowMasker (Hard)
Arabidopsis thaliana Col-0 (thale cress) (v1, id57742): NCBI WindowMasker (Hard)
Arabidopsis thaliana Col-0 (thale cress) (v-1, id4): unmasked
Genome Information
Genome ID:
16911
Sequence type:
unmasked: unmasked sequence data (gstid1)
Length:
119,667,750 bp
Tools:
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Datasets:
1
all.faa(v10.02, id66117)
Dataset Information
Name:
all.faa
(id66117)
Source:
TAIR: The Arabidopsis Information Resource
(id1)
Version:
10.02
Organism:
Arabidopsis thaliana Col-0 (thale cress)
Created:
2012-11-13 13:49:21
Chromosomes:
7
Total length:
119,667,750 bp
Tools:
OrganismView
Chromosomes:
1 (30,427,671 bp)
2 (19,698,289 bp)
3 (23,459,830 bp)
4 (18,585,056 bp)
5 (26,975,502 bp)
C (154,478 bp)
M (366,924 bp)
Chromosome Information
Chromosome ID:
1
Nucleotides:
30,427,671 bp
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Do not generate features for ncRNA genes (CDS genes only)
Include feature annotations (descriptive text; Geneontology; etc)
Ensure that GFF Name tag is unique for each feature
Do not propagate duplicate annotations to children
For GFF "ID" and "Parent" tags, use unique:
Name
Number
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