View source for Medically Relevant Genomes in CoGe

== List of Medical Model Genomes ==

{| class="wikitable"
!|Phylum
!|Class
!|Species
!|CoGe Genome Link
!|Related Genomes Available
!|Research Interest Examples
|-
|rowspan="20"|Chordata (Vertebrates)
|-
|rowspan="6"|Mammals
|Human
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=25747 Homo sapiens v 38 (NCBI)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=homo%20sapiens Homo subspecies]
|Disease modeling, ecology, genetic variation
|-
|Mouse
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=7073 Mus musculus C57BL/6J v GRCm28.p3 (NCBI)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=mus%20musculus Mus subspecies]
|Disease modeling, gene function
|-
|Rat
|[https://genomevolution.org/coge/GenomeInfo.pl?embed=&gid=26049 Rattus norvegicus v 6.0 (Ensembl)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=rattus Rattus species]
|Disease modeling, gene function
|-
|Rabbit
|[https://genomevolution.org/coge/GenomeInfo.pl?embed=&gid=26055 Oryctolagus cuniculus v 2.0 (Ensembl)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=oryctolagus Rabbit versions]
|Pharmaceutical testing, immune response
|-
|Guinea pig
|[https://genomevolution.org/coge/GenomeInfo.pl?embed=&gid=26056 Cavia porcellus inbred line 2N v 3.0 (Ensembl)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=cavia%20porcellus Guinea pig versions]
|Human disease, human immune response, toxicology
|-
|Pig
|[https://genomevolution.org/coge/GenomeInfo.pl?embed=&gid=26057 Sus scrofa v 10.2 (Ensembl)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=sus%20scrofa Sus scrofa versions]
|Allergen model species, organ model species
|-
|rowspan="3"|Birds
|Chicken
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=22736 Gallus gallus v 4.74 (Ensembl)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=gallus Gallus versions]
|Agriculture, developmental biology
|-
|Zebra Finch
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=19545 Taeniopygia guttata v 3.2.4 (BGI/Ensembl)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=Taeniopygia Taeniopygia versions]
|Learning, neural biology
|-
|Japanese Quail
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=26048 Coturnix japonica v 1.0 (NCBI)]
|
|Agriculture, developmental biology
|-
|rowspan="1"|Amphibians & Reptiles
|Western Clawed Frog (Xenopus)
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=12392 Xenopus tropicalis v 4.2.64 (Ensembl)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=xenopus Xenopus species]
|Vertebrate developmental biology
|-
|rowspan="9"|Fish
|Zebrafish
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=25001 Danio rerio (NCBI)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=danio%20rerio Danio versions]
|Vertebrate developmental biology, transgenics
|-
|Medaka
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=25001 Oryzias latipes v 1.0 (NCBI)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=oryzias%20latipes Oryzias versions]
|Vertebrate developmental biology, transgenics
|-
|Cichlids
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=25004 Maylandia zebra v 1.1 (NCBI)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=cichlid Cichlid species]
|Craniofacial development disorders
|-
|Mexican tetra (cave fish)
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=25004 Astyanax mexicanus v 1.0.2 (NCBI)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=astyanax Astyanax versions]
|Eye development and degeneration
|-
|Turquoise killifish
|[https://genomevolution.org/coge/GenomeInfo.pl?embed=&gid=26058 Nothobranchius furzeri GRZ v 1.0 (NCBI)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=nothobranchius Nothobranchius species]
|Aging model species
|-
|Southern platyfish
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=25014 Xiphophorus maculatus JP163A v 4.4.2]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=xiphophorus Xiphophorus versions]
|Melanoma, sexual maturity disorder model species
|-
|Amazon molly
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=25009 Poecilia formosa v 5.1.2 (NCBI)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=poecilia Poecilia species]
|Clonal model species, cancer research model 
|-
|Sheepshead minnow
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=26063 Cyprinodon variegatus v 1.0 (NCBI)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=cyprinodon Cyprinodon species]
|Environmental toxicology model 
|-
|Rainbow trout
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=25073 Oncorhynchus mykiss v 4.0 (Genoscope)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=oncorhynchus Oncorhynchus versions]
|Toxicology, liver cancer model
|-
|rowspan="4"|Ecdysozoa
|-
|rowspan="1"|Insects
|Fruit fly
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=10345 Fruit fly v 6.0 (NCBI)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=drosophila Drosophila species]
|Gene function
|-
|rowspan="1"|Platyhelmenthes
|Schmidtea mediterranea
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=26065 Schmidtea mediterranea v S2F2 (NCBI)]
|
|Cellular regeneration model, pluripotent stem cell model
|-
|rowspan="1"|Nematodes
|Caenorhabditis elegans
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=242 Caenorhabditis elegans v 9.0 (NCBI)]
|[https://genomevolution.org/coge/OrganismView.pl?org_name=caenorhabditis C. elegans species]
|Nematode model species, nervous system development model
|-
|}

== List of Disease Organism Genomes ==


== List of Human Endosymbiont Genomes ==

== Links ==
Notebook containing all medically relevant genomes in CoGe

Notebook containing medical model genomes

Notebook containing disease-causing organism genomes

Notebook containing human endosymbionts

=== Note: If you would like a genome added to this list please contact coge.genome (at) gmail.com ===