View source for SSWAP

==SSWAP: Simple Semantic Web Architecture and Protocol==

The SSWAP project is located: http://sswap.info/

SSWAP aims to make web-services semantically aware of one another.  This is achieved in a two step process:

# Marking up tools that "advertise" what data they consume, the manipulations/analyses they perform, and the analytical results/data they emit.
# Marking up data and sending it to a semantic web orchestrator that can find web-services that may operate on said data.

In collaboration with Damian Gessler (sswap@iplantcollaborative.org), the SSWAP project lead, CoGe is becoming sematically aware.

The first step was marking up FASTA data produced by [[FastaView]] and sending them to the SSWAP orchestrator http://sswap.iplantcollaborative.org .

This was accomplished by:

''Creating an appropriate JSON object string containing the sequence data and appropriate tags'':

 var myseq = $('#seq_text').val();
 var jsonRRG= {
    "prefix": {
        "data": "http://sswapmeet.sswap.info/data/",
        "mime": "http://sswapmeet.sswap.info/mime/",
        "seq": "http://sswapmeet.sswap.info/sequence/"
    },
    "http://sswap.info/examples/resources/canonical/canonicalResource": {},
    "mapping": {"_:subject" : "_:object"},
    "definitions" : {
    		      "_:subject" : {},
 		      "_:object" : {
 		      		     "rdf:type" : "seq:FASTA",
 				     "data:literalData" : myseq
 				   }
 		    },
 };
 var jsonString = JSON.stringify(jsonRRG);

And then sending it to sswap.iplantcollaborative.org (Presented using jquery and causes sswap.iplantc to open in a different window/tab)

 var url = "http://sswap.iplantcollaborative.org/ipc/create-pipeline-with-rrg";
 var myForm = document.createElement("FORM");
 myForm.method="post" ;
 myForm.action=url;
 myForm.setAttribute("target", "_blank");
 var myInput = document.createElement("textarea");
 myInput.name="rrg";
 myInput.value=jsonString;
 myForm.appendChild(myInput);
 document.body.appendChild(myForm);
 myForm.submit();
 document.body.removeChild(myForm);