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| *Aspergillus flavus strain NRRL3357: http://genomevolution.org/CoGe/OrganismView.pl?dsgid=7146 | | *Aspergillus flavus strain NRRL3357: http://genomevolution.org/CoGe/OrganismView.pl?dsgid=7146 |
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| ==Syntenic conservation of secondary metabolite gene clusters== | | ==Secondary metabolic gene clusters== |
| #Gene clusters identified by Doug Brown
| | [[Aspergillus flavus secondary metabolic gene clusters]] |
| #Syntenic comparison done with SynMap: http://genomevolution.org/CoGe/SynMap.pl?dsgid1=8171;dsgid2=7146;c=4;D=20;g=10;A=5;Dm=;gm=;w=0;b=1;ft1=1;ft2=1;do1=1;do2=1;do=40;dt=geneorder
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| #Merging of data by custom perl script.
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| ===Gene cluster 48===
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| ###cluster_48
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| AFLA_121440 AO070319000038 http://synteny.cnr.berkeley.edu/CoGe/GEvo.pl?fid1=44880786;fid2=58351035;dsgid1=7146;dsgid2=8171
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| AFLA_121450 AO070319000037 http://synteny.cnr.berkeley.edu/CoGe/GEvo.pl?fid1=44880789;fid2=58351040;dsgid1=7146;dsgid2=8171
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| AFLA_121460 No syntenic gene pair found
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| AFLA_121470 No syntenic gene pair found
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| AFLA_121480 No syntenic gene pair found
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| AFLA_121490 No syntenic gene pair found
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| AFLA_121500 No syntenic gene pair found
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| AFLA_121510 No syntenic gene pair found
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| AFLA_121520 No syntenic gene pair found
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| AFLA_121530 No syntenic gene pair found
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| AFLA_121540 No syntenic gene pair found
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| AFLA_121550 AO070319000034 http://synteny.cnr.berkeley.edu/CoGe/GEvo.pl?fid1=44880819;fid2=58351062;dsgid1=7146;dsgid2=8171
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| AFLA_121560 AO070319000033 http://synteny.cnr.berkeley.edu/CoGe/GEvo.pl?fid1=44880822;fid2=58351065;dsgid1=7146;dsgid2=8171
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| AFLA_121570 AO070319000031 http://synteny.cnr.berkeley.edu/CoGe/GEvo.pl?fid1=44880825;fid2=58351069;dsgid1=7146;dsgid2=8171
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| AFLA_121580 AO070319000030 http://synteny.cnr.berkeley.edu/CoGe/GEvo.pl?fid1=44880828;fid2=58351073;dsgid1=7146;dsgid2=8171
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| AFLA_121590 AO070319000029 http://synteny.cnr.berkeley.edu/CoGe/GEvo.pl?fid1=44880831;fid2=58351078;dsgid1=7146;dsgid2=8171
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| AFLA_121600 AO070319000028 http://synteny.cnr.berkeley.edu/CoGe/GEvo.pl?fid1=44880834;fid2=58351082;dsgid1=7146;dsgid2=8171
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| AFLA_121610 AO070319000027 http://synteny.cnr.berkeley.edu/CoGe/GEvo.pl?fid1=44880837;fid2=58351086;dsgid1=7146;dsgid2=8171
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| AFLA_121620 AO070319000026 http://synteny.cnr.berkeley.edu/CoGe/GEvo.pl?fid1=44880840;fid2=58351093;dsgid1=7146;dsgid2=8171
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| AFLA_121630 AO070319000025 http://synteny.cnr.berkeley.edu/CoGe/GEvo.pl?fid1=44880843;fid2=58351096;dsgid1=7146;dsgid2=8171
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| [[Image:Aspergillus cluster 48.png|thumb|center|800px|GEvo comparison of syntenic region between Aspergillus flavus and Aspergillus oryzae at gene cluster 48. Note the identified missing genes between the two strains are not present, though other genes are. Evidence for rapidly evolving gene clusters in terms of gene content.]] | |
