Cassava: Difference between revisions
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Created page with '==Syntenic Dotplots== thumb|center|600px|[[Syntenic dotplot of cassava against itself using the syntenic path assembly to o...' |
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==Syntenic Dotplots== | ==Syntenic Dotplots== | ||
[[File:Screen shot 2012-02-06 at 12.10.59 PM.png|thumb|center|600px|[[Syntenic dotplot]] of cassava against itself using the [[syntenic path assembly]] to order and orient contigs. Syntenic gene pairs have been color code by their [[Ks]] value. Purple regions are from a tetraploidy event in the cassava lineage, and the light blue are from the eurosid [[paleohexaploidy]].]] | [[File:Screen shot 2012-02-06 at 12.10.59 PM.png|thumb|center|600px|[[Syntenic dotplot]] of cassava against itself using the [[syntenic path assembly]] to order and orient contigs. Syntenic gene pairs have been color code by their [[Ks]] value. Purple regions are from a tetraploidy event in the cassava lineage, and the light blue are from the eurosid [[paleohexaploidy]]. Results may be regenerated at: http://genomevolution.org/r/4h5e]] | ||
==High-resolution [[GEvo]] analyses== | |||
[[File:Screen shot 2012-02-06 at 12.13.41 PM.png|thumb|center|600px| [[GEvo]] analysis of two syntenic cassava regions, likely derived from a lineage specific tetraploidy event. Results may be regenerated at: http://genomevolution.org/r/4h5d]] | |||
[[File:Screen shot 2012-02-06 at 12.58.08 PM.png|thumb|center|600px|[[GEvo]] analysis of two syntenic cassava regions, likely derived from the [[eudicot paleohexaploidy]]. Results may be regenerated at: http://genomevolution.org/r/4h5w]] | |||
Latest revision as of 19:59, 6 February 2012
Syntenic Dotplots
High-resolution GEvo analyses
