Amborella-amborella: Difference between revisions
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==New Version 1.0.15 annotations== | |||
[[File:Screen shot 2012-05-09 at 4.50.13 PM.png|thumb|1000px|center|Some evidence for internal synteny. Loose syntenic identification parameters used. Syntenic dots colored by synonymous mutation values. Noise is red-yellow. Real signal may be present in green. See histogram. Results may be regenerated at http://genomevolution.org/r/4s30]] | |||
[[File:Master 16909 16909.CDS-CDS.last.dag.all.go D80 g40 A4.aligncoords.gcoords ct0.w800.ass2.gene.s.ks.sr.cs1.csoS.log.nsd.png]] | |||
==Old Version== | |||
[[File:Master 16737 16737.CDS-CDS.lastz.dag.all.go D20 g10 A5.aligncoords.gcoords ct0.w1000.undefined.undefined.sr.cs1.csoS.nsd.png|thumb|400px|center|[[SynMap]] anlaysis of Amborella against itself. Syntenic signal in dotplot appears to be the result of noise, and not real syntenic. Analysis may be regenerated at: http://genomevolution.org/r/4f7m]] | [[File:Master 16737 16737.CDS-CDS.lastz.dag.all.go D20 g10 A5.aligncoords.gcoords ct0.w1000.undefined.undefined.sr.cs1.csoS.nsd.png|thumb|400px|center|[[SynMap]] anlaysis of Amborella against itself. Syntenic signal in dotplot appears to be the result of noise, and not real syntenic. Analysis may be regenerated at: http://genomevolution.org/r/4f7m]] | ||
[[File:Screen shot 2012-01-23 at 12.30.52 PM.png|thumb|800px|center|[[GEvo]] analysis of a syntenic signal from a [[SynMap]] Amborella v. Amborella comparison. Syntenic signal is not real. Result may be regenerated at: http://genomevolution.org/r/4f9a]] | [[File:Screen shot 2012-01-23 at 12.30.52 PM.png|thumb|800px|center|[[GEvo]] analysis of a syntenic signal from a [[SynMap]] Amborella v. Amborella comparison. Syntenic signal is not real. Result may be regenerated at: http://genomevolution.org/r/4f9a]] | ||
Latest revision as of 23:54, 9 May 2012
New Version 1.0.15 annotations
Old Version
