Amborella-amborella: Difference between revisions

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==New Version 1.0.15 annotations==
==New Version 1.0.15 annotations==
[[File:Screen shot 2012-05-09 at 4.50.13 PM.png|thumb|400px|center|Some evidence for internal synteny.  Loose syntenic identification parameters used.  Syntenic dots colored by synonymous mutation values.  Noise is red-yellow.  Real signal may be present in green.  See histogram.  Results may be regenerated at http://genomevolution.org/r/4s30]]
[[File:Screen shot 2012-05-09 at 4.50.13 PM.png|thumb|1000px|center|Some evidence for internal synteny.  Loose syntenic identification parameters used.  Syntenic dots colored by synonymous mutation values.  Noise is red-yellow.  Real signal may be present in green.  See histogram.  Results may be regenerated at http://genomevolution.org/r/4s30]]
[[File:Master 16909 16909.CDS-CDS.last.dag.all.go D80 g40 A4.aligncoords.gcoords ct0.w800.ass2.gene.s.ks.sr.cs1.csoS.log.nsd.png]]


==Old Version==
==Old Version==

Latest revision as of 23:54, 9 May 2012

New Version 1.0.15 annotations

Some evidence for internal synteny. Loose syntenic identification parameters used. Syntenic dots colored by synonymous mutation values. Noise is red-yellow. Real signal may be present in green. See histogram. Results may be regenerated at http://genomevolution.org/r/4s30

Old Version

SynMap anlaysis of Amborella against itself. Syntenic signal in dotplot appears to be the result of noise, and not real syntenic. Analysis may be regenerated at: http://genomevolution.org/r/4f7m
GEvo analysis of a syntenic signal from a SynMap Amborella v. Amborella comparison. Syntenic signal is not real. Result may be regenerated at: http://genomevolution.org/r/4f9a
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