SynFind Syntenic Depth Examples: Difference between revisions
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| [[Image:Screen shot 2012-03-28 at 8.48.43 AM.png|300px]] | | [[Image:Screen shot 2012-03-28 at 8.48.43 AM.png|300px]] | ||
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Obvious 2:2 depth. | |||
Share a recent whole genome duplication. Also share older whole genome duplictions (at least one) | Share a recent whole genome duplication. Also share older whole genome duplictions (at least one) | ||
Latest revision as of 01:08, 31 May 2012
| Syntenic Dopltot | Syntenic Depth Calculation | Known History |
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1:1 syntenic depth |
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Obvious 1:1 orthologous regions. Also has a "haze" of secondary synteny is due to the most recent vertebrate whole genome duplication even (1R). There is an older whole genome duplication too (2R). |
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Obvious 2:2 depth. Share a recent whole genome duplication. Also share older whole genome duplictions (at least one) |
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1:1 orthologous regions. Secondary syntenic "haze" form 1R. |