Amborella: Difference between revisions
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'''Objective:''' This page is to track information related to the analysis of the Amborella genome.= | '''Objective:''' This page is to track information related to the analysis of the Amborella genome. | ||
==Overview of polyploidy in the Angiosperms== | |||
[[File:Screen shot 2012-01-30 at 7.39.33 AM.png|thumb|center|600px|Amborella lacks all the polyploidy events found in the other angiosperms. While there is evidence of an angioperm-specific polyploidy based on phylogenetic evidence from transcriptome analyses (http://www.nature.com/nature/journal/v473/n7345/abs/nature09916.html), there is no structural evidence identified from Amborella-Amborella syntenic dotplots.]] | |||
==Amborella lacks the eudicot paleohexaploidy== | ==Amborella lacks the eudicot paleohexaploidy== | ||
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==Amborella gene models are okay== | ==Amborella gene models are okay== | ||
[[ | [[Amborella gene models]] | ||
==Synteny with Rice== | |||
[[Amborella-rice]] | |||
==Syntenic with Aquilegia coerulea (columbine)== | |||
Appears to be a 1xAmborella:2xColumbine relationship: | |||
[[Amborella-aquilegia]] | |||
==Some evidence of synteny with self-self comparison== | |||
[[Amborella-amborella]] | |||
==No evidence of synteny with Selaginella== | |||
[[Amborella-selaginella]] | |||
==[[Evidence for pre-angiosperm WGD]]== | |||
==[[Ambo v. monocots]]== | |||
Latest revision as of 14:07, 16 September 2012
Objective: This page is to track information related to the analysis of the Amborella genome.
Overview of polyploidy in the Angiosperms
Amborella lacks the eudicot paleohexaploidy
Amborella gene models are okay
Synteny with Rice
Syntenic with Aquilegia coerulea (columbine)
Appears to be a 1xAmborella:2xColumbine relationship: