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| | '''James Schnable''' | | '''James Schnable''' |
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| − | I'm a graduate student in the department of Plant and Microbial Biology at UC-Berkeley and a member of the Freeling lab. My research focuses on comparative grass genomics and the fate of genes following whole genome duplications. | + | I'm a [http://microscopy.berkeley.edu/~freeling/ the Freeling] alumn, now an assistant professor at the University of Nebraska-Lincoln. Visit the [http://www.schnablelab.org/ Schnable Lab website] to learn more about my ongoing research. |
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| − | Here at CoGePedia I maintain the [[Sequenced plant genomes]] and [[Classical Maize Genes]] resources. It's always a struggle to keep them up to date, so please don't hesitate to let me know if you find omissions in either list.
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| − | [http://www.skraelingmountain.com/ Complete online CV] | + | |
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| | = Contact info = | | = Contact info = |
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| − | email: <code><br>jschnable (@) berkeley.edu<br><br></code>Physical Address:<code><br>434 Koshland Hall (Mail: 111 Koshland Hall)<br>University of California-Berkeley<br>Berkeley, CA 94720</code> | + | email: <code><br>schnable (@) unl.edu<br><br></code> |
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| | = Publications = | | = Publications = |
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| − | [http://scholar.google.com/citations?user=cik4JVYAAAAJ An automatically updated list] of James Schnable's publications (Google Scholar profile). | + | [http://scholar.google.com/citations?user=cik4JVYAAAAJ An automatically updated list] of James Schnable's publications (Google Scholar profile). |
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| − | *Tang H, Lyons E, Pedersen B, '''Schnable JC''', Paterson AH, Freeling M. 2011. "Screening synteny blocks in pairwise genome comparisons through integer programming." ''BMC Bioinformatics'' DOI: [http://www.biomedcentral.com/1471-2105/12/102/abstract 10.1186/1471-2105-12-102]
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| − | *'''Schnable JC''', Pedersen BS, Subramaniam S, Freeling M. 2011. "Dose-sensitivity, conserved noncoding sequences and duplicate gene retention through multiple tetraploidies in the grasses." ''Frontiers in Plant Science'' DOI: [http://www.frontiersin.org/plant_genetics_and_genomics/10.3389/fpls.2011.00002/abstract 10.3389/fpls.2011.00002]
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| − | *'''Schnable JC''', Freeling M. 2011. "Genes identifed by visible mutant phenotypes show increased bias towards one of two maize subgenomes." ''PLoS One'' DOI: [http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0017855 10.1371/journal.pone.0017855]
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| − | *'''Schnable JC''', Springer NM, Freeling M. 2011. "Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss.". ''PNAS'' DOI: [http://www.pnas.org/content/108/10/4069.abstract 10.1073/pnas.1101368108]
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| − | *Woodhouse MR*, '''Schnable JC*''', Pedersen BS, Lyons E, Lisch D, Subramaniam S, Freeling M. 2010. "Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homeologs." ''PLoS Biology'' DOI:[http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1000409 10.1371/journal.pbio.1000409]
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| − | *The International Brachypodium Initiative. 2010. "Genome sequencing and analysis of the model grass Brachypodium distachyon." ''Nature'' DOI: [http://dx.doi.org/10.1038/nature08747 10.1038/nature08747]
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| − | [http://dx.doi.org/10.1038/nature08747 ](*) Authors Contributed Equally
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| − | = Education =
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| − | *2004-2008 B.A. Cornell University. Major: Biology with focuses in Genetics and Plant Biology.
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| − | *2008-present PhD (in progress) University of California-Berkeley. Department of Plant and Microbial Biology.
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