Difference between revisions of "MatrixView"
From CoGepedia
(Created page with 'Blosum 62 This displays alignment scoring matrices using a color heatmap for scores: *'''purple''': low *'''red''': high') |
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| − | [[Image:MatrixView-blosum62.png|thumb|right|500px|Blosum 62]] | + | [[Image:MatrixView-blosum62.png|thumb|right|500px|Blosum 62 scoring matix]] |
| + | [[Image:MatrixView-vertebrate-codon.png|thumb|right|500px|Codon scoring matrix generated from vertebrate genome alignments. Obtained from [http://www.biomedcentral.com/1471-2105/6/134 Schneider et. al. Empirical codon substitution matrix. 2005 BMC Bioinformatics] ]] | ||
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This displays alignment scoring matrices using a color heatmap for scores: | This displays alignment scoring matrices using a color heatmap for scores: | ||
*'''purple''': low | *'''purple''': low | ||
*'''red''': high | *'''red''': high | ||
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| + | You can directly access MatrixView [http://genomevolution.com/CoGe/MatrixView.pl here]. | ||
Latest revision as of 12:17, 29 March 2010
Codon scoring matrix generated from vertebrate genome alignments. Obtained from Schneider et. al. Empirical codon substitution matrix. 2005 BMC Bioinformatics
This displays alignment scoring matrices using a color heatmap for scores:
- purple: low
- red: high
You can directly access MatrixView here.
