Carnivorous plants: Difference between revisions
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==Gene model evidence== | ==Gene model evidence== | ||
[[Genlisea aurea gene models]] | [[Genlisea aurea gene models]] | ||
==Lentibulariacceae-specific WGD characterization== | ==Lentibulariacceae-specific WGD characterization== | ||
[[Genlisea intragenomic analyses]] | [[Genlisea intragenomic analyses]] | ||
[[Utricularia intragenomic analyses]]: Evidence that Utricularia has had 2 whole genome duplications since divergence with tomato | [[Utricularia intragenomic analyses]]: Evidence that Utricularia has had 2 whole genome duplications since divergence with tomato | ||
==Differential fractionation of Utricularia and Genlisea (may be due to the polyploidy noted above)== | ==Differential fractionation of Utricularia and Genlisea (may be due to the polyploidy noted above)== | ||
[[File:Screen shot 2012-01-31 at 2.53.17 PM.png|thumb|center|600px|GEvo analysis of Genlisea and Utricularia to the orthologous outgroup region of Mimulus. Genlisea and Utricularia demostrate a pattern of differential fractionation. Results can be regenerated at: http://genomevolution.org/r/4gbw]] | [[File:Screen shot 2012-01-31 at 2.53.17 PM.png|thumb|center|600px|GEvo analysis of Genlisea and Utricularia to the orthologous outgroup region of Mimulus. Genlisea and Utricularia demostrate a pattern of differential fractionation. Results can be regenerated at: http://genomevolution.org/r/4gbw]] | ||
==[[Syntenic Depth]] Analysis== | |||
[[Potato-Utricularia-Genlisea Syntenic Depth]] | |||
[[Tomato-Utricularia Syntenic Depth]] | |||
==Synteny between Genlisea and Utricularia== | ==Synteny between Genlisea and Utricularia== | ||
Latest revision as of 23:44, 19 June 2012
Gene model evidence
Lentibulariacceae-specific WGD characterization
Genlisea intragenomic analyses
Utricularia intragenomic analyses: Evidence that Utricularia has had 2 whole genome duplications since divergence with tomato
Differential fractionation of Utricularia and Genlisea (may be due to the polyploidy noted above)
Syntenic Depth Analysis
Potato-Utricularia-Genlisea Syntenic Depth
Tomato-Utricularia Syntenic Depth
Synteny between Genlisea and Utricularia
- http://genomevolution.org/r/4gta
- http://genomevolution.org/r/4gte
- http://genomevolution.org/r/4gtg
- http://genomevolution.org/r/4gth
- http://genomevolution.org/r/4gtj
- http://genomevolution.org/r/4gtk
- http://genomevolution.org/r/4gyi
- http://genomevolution.org/r/4gyg
- http://genomevolution.org/r/4gye
- http://genomevolution.org/r/4gyc
- http://genomevolution.org/r/4gya
- http://genomevolution.org/r/4gy8
- http://genomevolution.org/r/4gy6
Comparison to pseudoassemblies
Utricularia and Genlisea pseudoassembly
Syntenic dotplots
Phylogeny
polyploidy events
Evidence
Master
