Difference between revisions of "CoGeBlast"
From CoGepedia
| Line 8: | Line 8: | ||
}} | }} | ||
| − | CoGeBlast is CoGe's interface to | + | CoGeBlast is CoGe's interface to [http://en.wikipedia.org/wiki/BLAST|BLAST (Basic Local Alignment Search Tool)] and other related algorithms. With CoGeBlast, one can take any query sequence, whether user submitted or requested from the CoGe database, and compare it against any number of genomes in the CoGe database |
Revision as of 13:50, 3 March 2009
 | |
| Software company | CoGe Team |
|---|---|
| Analysis Type | Blast query sequences against genomes stored in CoGe database |
| Working state | Released |
| Tools Utilized | blastn, tblastn, tblastx, blastz |
| Website | http://synteny.cnr.berkeley.edu/CoGe/CoGeBlast.pl |
CoGeBlast is CoGe's interface to (Basic Local Alignment Search Tool) and other related algorithms. With CoGeBlast, one can take any query sequence, whether user submitted or requested from the CoGe database, and compare it against any number of genomes in the CoGe database
Introduction
The purpose of CoGeBlast is to blah blah use genomes blah.
Why
Because.
Overview
We have docs for this
Documentation
You should read this if you are confused.
Tutorials
We has them.
