GenomeView examples: Difference between revisions
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[[Image:GenomeView-background.png|thumb| | [[Image:GenomeView-background.png|thumb|800px|left|Background of chromosome colored green to show GC rich regions and white to show AT rich regions]] | ||
[[Image:GenomeView-gene.png|thumb| | [[Image:GenomeView-gene.png|thumb|800px|left|Gene models drawn as gray arrows]] | ||
[[Image:GenomeView-mRNA.png|thumb| | [[Image:GenomeView-mRNA.png|thumb|800px|left|mRNA drawn as blue arrows (on top of gray genes)]] | ||
[[Image:GenomeView-CDS.png|thumb| | [[Image:GenomeView-CDS.png|thumb|800px|left|Protein coding regions (CDS) drawn as green arrows (on top of gray genes and blue mRNAs)]] | ||
[[Image:GeLo-example.png|thumb| | [[Image:GeLo-example.png|thumb|800px|left|Overlapping genomic features are detected and expanded to show alternatively spiced transcripts]] | ||
[[Image:GenomeView-Unsequenced.png|thumb| | [[Image:GenomeView-Unsequenced.png|thumb|800px|left|Genomic region with unsequenced regions colored orange from the genome of Carica papaya]] | ||
[[Image:GenomeView-masked.png|thumb| | [[Image:GenomeView-masked.png|thumb|800px|left|Genomic region with masked sequence colored purple]] | ||
[[Image:GenomeView-rRNA.png|thumb| | [[Image:GenomeView-rRNA.png|thumb|800px|left|Microbial (archaea) genomic region with 23S and 16S rRNA genes drawn as wide gray arrows]] | ||
[[Image:GenomeView-pseudogene-2.png|thumb|500px|Microbial (archaea) genomic region with many pseudogenes drawn as orange-red arrows]] | [[Image:GenomeView-pseudogene-2.png|thumb|500px|Microbial (archaea) genomic region with many pseudogenes drawn as orange-red arrows]] | ||
[[Image:GenomeView-wobbleGC1.png|thumb| | [[Image:GenomeView-wobbleGC1.png|thumb|800px|left|Wobble GC content colored for Chlamydomonas reinhardtii genome. Green means high GC content in codon wobble positions]] | ||
[[Image:GenomeView-wobbleGC2.png|thumb| | [[Image:GenomeView-wobbleGC2.png|thumb|800px|left|Wobble GC content colored for Chlamydomonas reinhardtii chloroplast genome. Red means low GC content in codon wobble positions]] | ||
[[Image:GenomeView-wobbleGC3.png|thumb| | [[Image:GenomeView-wobbleGC3.png|thumb|800px|left|Wobble GC content colored for Chlamydomonas reinhardtii mitochondria genome. Yellow means ~50% GC content in codon wobble positions]] | ||
Revision as of 18:49, 5 February 2010
