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Graduate student in the department of Plant and Microbial Biology at UC-Berkeley and a member of the Freeling lab. My research focuses on comparative grass genomics and the fate of genes following whole genome duplications. | Graduate student in the department of Plant and Microbial Biology at UC-Berkeley and a member of the Freeling lab. My research focuses on comparative grass genomics and the fate of genes following whole genome duplications. | ||
[http://scholar.google.com/citations?user=cik4JVYAAAAJ Complete online CV] | |||
= Contact info = | = Contact info = | ||
Revision as of 02:44, 22 July 2011
James Schnable
Graduate student in the department of Plant and Microbial Biology at UC-Berkeley and a member of the Freeling lab. My research focuses on comparative grass genomics and the fate of genes following whole genome duplications.
Contact info
email:
jschnable (@) berkeley.edu
434 Koshland Hall (Mail: 111 Koshland Hall)
University of California-Berkeley
Berkeley, CA 94720
Publications
An automatically updated list of James Schnable's publications (Google Scholar profile).
- Tang H, Lyons E, Pedersen B, Schnable JC, Paterson AH, Freeling M. 2011. "Screening synteny blocks in pairwise genome comparisons through integer programming." BMC Bioinformatics DOI: 10.1186/1471-2105-12-102
- Schnable JC, Pedersen BS, Subramaniam S, Freeling M. 2011. "Dose-sensitivity, conserved noncoding sequences and duplicate gene retention through multiple tetraploidies in the grasses." Frontiers in Plant Science DOI: 10.3389/fpls.2011.00002
- Schnable JC, Freeling M. 2011. "Genes identifed by visible mutant phenotypes show increased bias towards one of two maize subgenomes." PLoS One DOI: 10.1371/journal.pone.0017855
- Schnable JC, Springer NM, Freeling M. 2011. "Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss.". PNAS DOI: 10.1073/pnas.1101368108
- Woodhouse MR*, Schnable JC*, Pedersen BS, Lyons E, Lisch D, Subramaniam S, Freeling M. 2010. "Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homeologs." PLoS Biology DOI:10.1371/journal.pbio.1000409
- The International Brachypodium Initiative. 2010. "Genome sequencing and analysis of the model grass Brachypodium distachyon." Nature DOI: 10.1038/nature08747
[1](*) Authors Contributed Equally
Education
- 2004-2008 B.A. Cornell University. Major: Biology with focuses in Genetics and Plant Biology.
- 2008-present Graduate Work. University of California-Berkeley, 2008-present. Department of Plant and Microbial Biology.