Gobe: Difference between revisions
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Gobe is the name for the interface for GEvo that allows users interact with sequence alignments from multiple genomic regions. Gobe is written in Flash and requires the latest version of Adobe's [http://www.adobe.com/products/flashplayer/ Flash Player] to work. Gobe allows uses to select regions of sequence similarity and will draw lines connecting those regions in order to identify and characterize patterns of genome evolution such as synteny, inversions, duplications, transpositions, insertions, and deletions. Gobe can be downloaded [http://gobe.googlecode.com here]. | Gobe is the name for the interface for GEvo that allows users interact with sequence alignments from multiple genomic regions. Gobe is written in Flash and requires the latest version of Adobe's [http://www.adobe.com/products/flashplayer/ Flash Player] to work. Gobe allows uses to select regions of sequence similarity and will draw lines connecting those regions in order to identify and characterize patterns of genome evolution such as synteny, inversions, duplications, transpositions, insertions, and deletions. Gobe can be downloaded [http://gobe.googlecode.com here]. | ||
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Brent has updated Gobe's visualization to use translucent wedges for connecting regions of sequence similarity, and a host of other improvements. | Brent has updated Gobe's visualization to use translucent wedges for connecting regions of sequence similarity, and a host of other improvements. | ||
[[Image:Gobe-new-vis.png]] | [[Image:Gobe-new-vis.png]] | ||
[[Image:gobe-new.png|thumb|500px|New visualization of gobe]] | |||
[[Image:gobe-old.png|thumb|500px|Old visualization of gobe]] | |||
Revision as of 23:26, 21 July 2009
Gobe is the name for the interface for GEvo that allows users interact with sequence alignments from multiple genomic regions. Gobe is written in Flash and requires the latest version of Adobe's Flash Player to work. Gobe allows uses to select regions of sequence similarity and will draw lines connecting those regions in order to identify and characterize patterns of genome evolution such as synteny, inversions, duplications, transpositions, insertions, and deletions. Gobe can be downloaded here.
Gobe is written and maintained by Brent Pedersen.
Brent has updated Gobe's visualization to use translucent wedges for connecting regions of sequence similarity, and a host of other improvements.
