Difference between revisions of "Carnivorous plants"
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(→Evidence that Utricularia has had a whole genome duplication following its divergence with tomato: fractionation of gene content in two distinct Utricularia genomic regions) |
(→Evidence that Utricularia has had a whole genome duplication following its divergence with tomato: fractionation of gene content in two distinct Utricularia genomic regions) |
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− | ==Evidence that Utricularia has had a whole genome duplication following its divergence with tomato: fractionation of gene content in two distinct Utricularia genomic regions== | + | ==Evidence that Utricularia has had a whole genome duplication following its divergence with tomato: [[fractionation]] of gene content in two distinct Utricularia genomic regions== |
− | [[File:Screen shot 2012-02-01 at 2.48.16 PM.png|thumb|center|600px|GEvo analylsis of 2xUtricularia regions to 1xTomato regions. The Utricularia regions are syntenic to the same reigon of tomato and show extensive fractionation. Results may be regenerated at http://genomevolution.org/r/4gi8]] | + | [[File:Screen shot 2012-02-01 at 2.48.16 PM.png|thumb|center|600px|GEvo analylsis of 2xUtricularia regions to 1xTomato regions. The Utricularia regions are syntenic to the same reigon of tomato and show extensive [[fractionation]] and [[intercalated synteny]]. Results may be regenerated at http://genomevolution.org/r/4gi8]] |
[[File:Screen Shot 2012-02-06 at 6.26.10 AM2.png|thumb|center|600px|GEvo analysis of [[pseudoassembly]] Utricularia to tomato. The pseudoassembly of Utricularia is based on the [[syntenic path assembly]] to tomato. As such, duplicated utricularia genomic regions will appear next to each other. If Utricularia has had an independent [[WGD]] followed by fractionation, these neighboring pieces will show [[intercalated synteny]] to tomato. Results may be regenerated at http://genomevolution.org/r/4h2c]] | [[File:Screen Shot 2012-02-06 at 6.26.10 AM2.png|thumb|center|600px|GEvo analysis of [[pseudoassembly]] Utricularia to tomato. The pseudoassembly of Utricularia is based on the [[syntenic path assembly]] to tomato. As such, duplicated utricularia genomic regions will appear next to each other. If Utricularia has had an independent [[WGD]] followed by fractionation, these neighboring pieces will show [[intercalated synteny]] to tomato. Results may be regenerated at http://genomevolution.org/r/4h2c]] |
Revision as of 07:41, 6 February 2012
Contents
- 1 Evidence that Utricularia has had a whole genome duplication following its divergence with tomato: fractionation of gene content in two distinct Utricularia genomic regions
- 2 Differential fractionation of Utricularia and Genlisea (may be due to the polyploidy noted above)
- 3 Synteny between Genlisea and Utricularia
- 4 Syntenic dotplots
- 5 Phylogeny
Evidence that Utricularia has had a whole genome duplication following its divergence with tomato: fractionation of gene content in two distinct Utricularia genomic regions
Differential fractionation of Utricularia and Genlisea (may be due to the polyploidy noted above)
Synteny between Genlisea and Utricularia
- http://genomevolution.org/r/4gta
- http://genomevolution.org/r/4gte
- http://genomevolution.org/r/4gtg
- http://genomevolution.org/r/4gth
- http://genomevolution.org/r/4gtj
- http://genomevolution.org/r/4gtk
- http://genomevolution.org/r/4gyi
- http://genomevolution.org/r/4gyg
- http://genomevolution.org/r/4gye
- http://genomevolution.org/r/4gyc
- http://genomevolution.org/r/4gya
- http://genomevolution.org/r/4gy8
- http://genomevolution.org/r/4gy6