Difference between revisions of "Carnivorous plants"
From CoGepedia
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[[File:Screen shot 2012-02-01 at 2.48.16 PM.png|thumb|center|600px|GEvo analylsis of 2xUtricularia regions to 1xTomato regions. The Utricularia regions are syntenic to the same reigon of tomato and show extensive [[fractionation]] and [[intercalated synteny]]. Results may be regenerated at http://genomevolution.org/r/4gi8]] | [[File:Screen shot 2012-02-01 at 2.48.16 PM.png|thumb|center|600px|GEvo analylsis of 2xUtricularia regions to 1xTomato regions. The Utricularia regions are syntenic to the same reigon of tomato and show extensive [[fractionation]] and [[intercalated synteny]]. Results may be regenerated at http://genomevolution.org/r/4gi8]] | ||
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==Differential fractionation of Utricularia and Genlisea (may be due to the polyploidy noted above)== | ==Differential fractionation of Utricularia and Genlisea (may be due to the polyploidy noted above)== | ||
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* http://genomevolution.org/r/4gy8 | * http://genomevolution.org/r/4gy8 | ||
* http://genomevolution.org/r/4gy6 | * http://genomevolution.org/r/4gy6 | ||
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| + | ==Comparison to [[pseudoassemblies]]== | ||
| + | [[Utricularia and Genlisea pseudoassembly]] | ||
==Syntenic dotplots== | ==Syntenic dotplots== | ||
Revision as of 10:54, 6 February 2012
Contents
- 1 Evidence that Utricularia has had a whole genome duplication following its divergence with tomato: fractionation of gene content in two distinct Utricularia genomic regions
- 2 Differential fractionation of Utricularia and Genlisea (may be due to the polyploidy noted above)
- 3 Synteny between Genlisea and Utricularia
- 4 Comparison to pseudoassemblies
- 5 Syntenic dotplots
- 6 Phylogeny
Evidence that Utricularia has had a whole genome duplication following its divergence with tomato: fractionation of gene content in two distinct Utricularia genomic regions
GEvo analylsis of 2xUtricularia regions to 1xTomato regions. The Utricularia regions are syntenic to the same reigon of tomato and show extensive fractionation and intercalated synteny. Results may be regenerated at http://genomevolution.org/r/4gi8
Differential fractionation of Utricularia and Genlisea (may be due to the polyploidy noted above)
GEvo analysis of Genlisea and Utricularia to the orthologous outgroup region of Mimulus. Genlisea and Utricularia demostrate a pattern of differential fractionation. Results can be regenerated at: http://genomevolution.org/r/4gbw
Synteny between Genlisea and Utricularia
- http://genomevolution.org/r/4gta
- http://genomevolution.org/r/4gte
- http://genomevolution.org/r/4gtg
- http://genomevolution.org/r/4gth
- http://genomevolution.org/r/4gtj
- http://genomevolution.org/r/4gtk
- http://genomevolution.org/r/4gyi
- http://genomevolution.org/r/4gyg
- http://genomevolution.org/r/4gye
- http://genomevolution.org/r/4gyc
- http://genomevolution.org/r/4gya
- http://genomevolution.org/r/4gy8
- http://genomevolution.org/r/4gy6
Comparison to pseudoassemblies
Utricularia and Genlisea pseudoassembly
Syntenic dotplots
Phylogeny
polyploidy events
