Difference between revisions of "LoadAnnotation"

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===Data File===
 
===Data File===
You can select and retrieve data file located at:
+
Annotations are specified in GFF format (see [[GFF ingestion]] for details).  You can select and retrieve the a GFF file from multiple sources:
 
*The iPlant Data Store
 
*The iPlant Data Store
 
*A URL (FTP/HTTP) server
 
*A URL (FTP/HTTP) server
 
*Your computer (Upload)
 
*Your computer (Upload)
 
===Data Format===
 

Revision as of 12:41, 17 April 2013

LoadAnnotation enables you to load a set of annotation data for a genome in CoGe. The annotation can then be viewed in GenomeView.

CoGe's LoadAnnotation

Input

  • Version: Version of annotation
  • Source: Where is the data from? This could be you, your lab, your university, a sequencing center, your collaborator.
  • Restricted: Is this annotation public or restricted to you and your collaborators
  • Genome: Select the appropriate genome from CoGe
  • Select Data File: Opens a window for specifying the input data file
  • Name: Name of annotation data set (optional)
  • Description: Description of annotation data set (optional)

Data File

Annotations are specified in GFF format (see GFF ingestion for details). You can select and retrieve the a GFF file from multiple sources:

  • The iPlant Data Store
  • A URL (FTP/HTTP) server
  • Your computer (Upload)