Local alignment: Difference between revisions
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Local-local alignment is best for detecting remote homologs and identifying evolutionary conserved domains. The matches may have variable lengths and share only partial similarity to the query sequence in any position. It is a default protocol of BLAST and PSI-BLAST. | Local-local alignment is best for detecting remote [[homologs]] and identifying evolutionary conserved domains. The matches may have variable lengths and share only partial similarity to the query sequence in any position. It is a default protocol of BLAST and PSI-BLAST. | ||
Revision as of 15:59, 24 September 2009
Local-local alignment is best for detecting remote homologs and identifying evolutionary conserved domains. The matches may have variable lengths and share only partial similarity to the query sequence in any position. It is a default protocol of BLAST and PSI-BLAST.