CoGepedia:Current events: Difference between revisions
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==CoGe on OpenHelix== | ==CoGe on OpenHelix and James and the Giant Corn== | ||
Nov. 18th 2009 | Nov. 18th 2009 | ||
Phillipe Lamesch from TAIR passed along a link to [http://blog.openhelix.com/?p=2913 openhelix.com] highlighting CoGe's tool GEvo. They put together a nice [http://www.openhelix.com/downloads/jing/gevo.swf video] showing GEvo. They, in turn, found this on a posting at the blog of [http://www.jamesandthegiantcorn.com/2009/11/07/obama-on-nsf-fellowships/ James and the Giant Corn] who had used GEvo for a grant proposal. | Phillipe Lamesch from TAIR passed along a link to [http://blog.openhelix.com/?p=2913 openhelix.com] highlighting CoGe's tool GEvo. They put together a nice [http://www.openhelix.com/downloads/jing/gevo.swf video] showing GEvo. They, in turn, found this on a posting at the blog of [http://www.jamesandthegiantcorn.com/2009/11/07/obama-on-nsf-fellowships/ James and the Giant Corn] who had used GEvo for a grant proposal. | ||
Revision as of 07:14, 19 November 2009
CoGe on OpenHelix and James and the Giant Corn
Nov. 18th 2009 Phillipe Lamesch from TAIR passed along a link to openhelix.com highlighting CoGe's tool GEvo. They put together a nice video showing GEvo. They, in turn, found this on a posting at the blog of James and the Giant Corn who had used GEvo for a grant proposal.
Maize Pseudomolecule Assembly with Gene Models Released
Oct. 20th 2009
Thanks to maizesequence.org for providing the sequence and annotations. The current pseudomolecule assembly of maize has been loaded into CoGe.
- Link to OrganismView for complete set of gene models.
- Link to OrganismView for filtered gene model set.
- Maize-Sorghum syntenic dotplot with syntologs colored by synonymous rate change.
- Maize-Maize syntenic dotplot with syntologs colored by synoonymous rate change.
CoGe surpasses 7000 organisms in its database!
More fun for everyone!
NCBI Genome Loader Updated
CoGe's automated NCBI genome loader has been updated and is once again checking NCBI regularly for new and updated genomes. You can get a snapshot of the number or organisms and genomic sequence in CoGe by checking its homepage, search for your genome of interest using OrganismView.
CoGe is linked to TARGeT: Tree Analysis of Related Genes and Transposons
You can send a set of fasta sequence generated by FastaView directly to TARGeT.
New version of Gobe release!
Read general announcement Gobe
Version 3 of CoGe is released!
Read general announcement CoGe version 3.