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Created page with ' ===CoGe was developed at UC Berkeley and falls under their license which can be read at: http://ipira.berkeley.edu/page.php?nav=41=== CoGe's software is divided into several c...' |
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===CoGe was developed at UC Berkeley and falls under their license which can be read at: http://ipira.berkeley.edu/page.php?nav=41=== | ===CoGe was developed at UC Berkeley and falls under their license which can be read at: http://ipira.berkeley.edu/page.php?nav=41=== | ||
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#Database (mysql) | #Database (mysql) | ||
#Database API (perl) | #Database API (perl) | ||
#Genome Location Visualization: GeLo (perl) | #Genome Location Visualization: [[GeLo]] (perl) | ||
#Website and applications (perl, javascript, python, flash, HTML) | #Website and applications (perl, javascript, python, flash, HTML) | ||
#Other stuff: alignment algorithms, etc. | #Other stuff: alignment algorithms, etc. | ||
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As documentation often lags behind development, much of CoGe's software is not in a suitable condition for release. However, once it has been, we will post its code here. Also, we will be happy to provide any code as requested and do our best to answer any questions you may have about it. | As documentation often lags behind development, much of CoGe's software is not in a suitable condition for release. However, once it has been, we will post its code here. Also, we will be happy to provide any code as requested and do our best to answer any questions you may have about it. | ||
==Download CoGe's genome visualization library [[GeLo]]== | |||
[[GeLo | here!]] | |||
[[Image:GeLo-example.png|thumb|500px]] | |||
Revision as of 18:58, 30 November 2009
CoGe's software is divided into several components:
- Database (mysql)
- Database API (perl)
- Genome Location Visualization: GeLo (perl)
- Website and applications (perl, javascript, python, flash, HTML)
- Other stuff: alignment algorithms, etc.
As documentation often lags behind development, much of CoGe's software is not in a suitable condition for release. However, once it has been, we will post its code here. Also, we will be happy to provide any code as requested and do our best to answer any questions you may have about it.
Download CoGe's genome visualization library GeLo
