How to extract genomic features: Difference between revisions
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===Find your genome of interest in [[OrganismView]]=== | ===Find your genome of interest in [[OrganismView]]=== | ||
#Go to [[OrganismView ]] and search for your organism by name by typing part of its name in the name search box, or part of the [[organism description]] in the description box. | |||
#Select the correct organism from the organism list | |||
#Select the appropriate genome from the list of genomes for that organism | |||
===Find your [[genomic feature]] in [[FeatView]]=== | ===Find your [[genomic feature]] in [[FeatView]]=== | ||
===Visualizing a genomic region of interest in [[GenomeView]]=== | ===Visualizing a genomic region of interest in [[GenomeView]]=== | ||
Revision as of 05:34, 2 January 2010
Overview
Extracting genomic features from a genomic region in a genome of interest is easy using GenomeView. All you need to do is:
- Find your genome of interest in OrganismView or your genomic feature in FeatView
- Visualize the genomic region of interest in GenomeView
- Select and export a genomic region from OrganismView for automatic feature extraction using FeatList
- Select the features of interest and send them to FastaView to get their sequences in fasta format
Find your genome of interest in OrganismView
- Go to OrganismView and search for your organism by name by typing part of its name in the name search box, or part of the organism description in the description box.
- Select the correct organism from the organism list
- Select the appropriate genome from the list of genomes for that organism