Aspergillus oryzae and flavus: Difference between revisions
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[[Image:Dotplot Aspergillus-oryzae versus flavus.png|thumb|600px|right|Syntenic dotplot between two species/strains of Aspergillus: flavus (x-axis) and oryzae (y-axis). Black arrows point to syntenic discontinuities where there has been a discernible insertion or deletion in one genome. Red dashed lines highlight a pair of chromosomes that have possibly exchanged arms. While it is not possible to assign the event to either organism from this plot, it also could be the result of a genome assembly error. This analysis can be regenerated at: http://genomevolution.org/CoGe/SynMap.pl?dsgid1=8171;dsgid2=7146;c=4;D=20;g=10;A=5;Dm=;gm=;w=0;b=1;ft1=1;ft2=1;do1=1;do2=1;do=40;dt=geneorder .]] | [[Image:Dotplot Aspergillus-oryzae versus flavus.png|thumb|600px|right|Syntenic dotplot between two species/strains of Aspergillus: flavus (x-axis) and oryzae (y-axis). Black arrows point to syntenic discontinuities where there has been a discernible insertion or deletion in one genome. Red dashed lines highlight a pair of chromosomes that have possibly exchanged arms. While it is not possible to assign the event to either organism from this plot, it also could be the result of a genome assembly error. This analysis can be regenerated at: http://genomevolution.org/CoGe/SynMap.pl?dsgid1=8171;dsgid2=7146;c=4;D=20;g=10;A=5;Dm=;gm=;w=0;b=1;ft1=1;ft2=1;do1=1;do2=1;do=40;dt=geneorder .]] | ||
Overview of genomes: | |||
*Aspergillus oryzae strain RIB 40: http://genomevolution.org/CoGe/OrganismView.pl?dsgid=8171 | |||
*Aspergillus flavus strain NRRL3357: http://synteny.cnr.berkeley.edu/CoGe/OrganismView.pl?dsgid=7146 | |||
Revision as of 03:51, 13 April 2010
Overview of genomes:
- Aspergillus oryzae strain RIB 40: http://genomevolution.org/CoGe/OrganismView.pl?dsgid=8171
- Aspergillus flavus strain NRRL3357: http://synteny.cnr.berkeley.edu/CoGe/OrganismView.pl?dsgid=7146