Tutorial for High School Students: Difference between revisions

From CoGepedia
Jump to navigation Jump to search
Michaeln (talk | contribs)
Michaeln (talk | contribs)
mNo edit summary
Line 7: Line 7:
'''Basics'''<br>  
'''Basics'''<br>  


{| cellspacing="1" cellpadding="1" border="1" style="width: 1021px; height: 163px;"
{| cellspacing="1" cellpadding="1" border="1" style="width: 1101px; height: 163px;"
|-
|-
! scope="col" | #  
! scope="col" | #  
Line 30: Line 30:
|-
|-
| &nbsp; 4  
| &nbsp; 4  
| Synteny: getting the big picture ( [[TestMN]] )<br>  
| [[Synteny: Getting the Big Picture]]<br>  
| Learn about a great way of comparing two complete genomes (syntenic dot plots)<br>  
| Learn about a great way of comparing two complete genomes (syntenic dot plots)<br>  
| [http://www.youtube.com/watch?v=I-dUsMuIkMg&feature=player_embedded SynMap]
| [http://www.youtube.com/watch?v=I-dUsMuIkMg&feature=player_embedded SynMap]
Line 39: Line 39:
'''Advanced'''<br>  
'''Advanced'''<br>  


{| cellspacing="1" cellpadding="1" border="1" style="width: 984px; height: 80px;"
{| cellspacing="1" cellpadding="1" border="1" style="width: 1102px; height: 83px;"
|-
|-
! scope="col" | #  
! scope="col" | #  

Revision as of 20:42, 18 June 2010

Overview

This tutorial is intended as a walkthrough for high school students to help them navigate and fully utilize the CoGe program.

Lessons

Basics

# Name Description   New Program Used
  1  Required Background Information Explains the basic genetic concepts and vocabulary required to use CoGe None
  2 Visually Comparing Genomes Learn how to generate a pictorial representation of genomes OrganismView & GenomeView
  3 Computationally Comparing Different Genomes Learn how to have computers compare DNA from different organisms
FastaView, CoGeBlast, GEvo
  4 Synteny: Getting the Big Picture
Learn about a great way of comparing two complete genomes (syntenic dot plots)
SynMap


Advanced

# Name Description
 1 Identifying Transposons Learn how to identify transposon which have never been discovered before
 2
 3