Amborella: Difference between revisions

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==Amborella gene models are okay==
==Amborella gene models are okay==
[[Image:Screen shot 2012-01-22 at 5.04.30 PM.png|thumb|left|800px|[[GEvo]] analysis of annotated Ambroella v. three syntenic grape regions (derived from the [[paleohexaploidy]]).  Analysis can be regenerated at: http://genomevolution.org/r/4f4o]]
[[Image:Screen shot 2012-01-22 at 5.04.30 PM.png|thumb|left|600px|[[GEvo]] analysis of annotated Ambroella v. three syntenic grape regions (derived from the [[paleohexaploidy]]).  Analysis can be regenerated at: http://genomevolution.org/r/4f4o]]
 
==No evidence of synteny with Selaginella==
[[File:Master 16737 1636.CDS-CDS.lastz.dag.all.go D20 g10 A5.aligncoords.gcoords ct0.w1000.s.sr.cs1.csoS.png|thumb|left|400px|SynMap: Amborella (x-axis) v. Selaginella (y-axis). No evidence of syntenic. http://genomevolution.org/r/4f56]]

Revision as of 00:39, 23 January 2012

Objective: This page is to track information related to the analysis of the Amborella genome.=

Amborella lacks the eudicot paleohexaploidy

Grape-amborella

Amborella gene models are okay

GEvo analysis of annotated Ambroella v. three syntenic grape regions (derived from the paleohexaploidy). Analysis can be regenerated at: http://genomevolution.org/r/4f4o

No evidence of synteny with Selaginella

SynMap: Amborella (x-axis) v. Selaginella (y-axis). No evidence of syntenic. http://genomevolution.org/r/4f56