Experiment Metadata: Difference between revisions

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Note: adding "_link" to the end of the field name denotes a link for another column (i.e., columns "citation" and "citation_link")
Note: adding "_link" to the end of the field name denotes a link for another column (i.e., columns "citation" and "citation_link")
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Example:<br>
Example:<br>

Revision as of 20:41, 1 May 2014

The experiment metadata file is a tab-separated file containing a header line followed by a metadata line for each experiment. There are some required columns and free-form optional columns.

Required Columns:

  • Filename: the name of the data file for the
  • Name: the name of the experiment

Optional Columns (in any order):

  • Description: a description of the experiment
  • Source: the source of the data file (i.e., JGI)
  • Version: the version number
  • Restricted: restrict the data from public access ("yes" or "no", default is no)

Note: adding "_link" to the end of the field name denotes a link for another column (i.e., columns "citation" and "citation_link")

Example:

Looks like this: http://genomevolution.org/CoGe/ExperimentView.pl?eid=193