Identifying SNPs: Difference between revisions
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[[File:ExperimentView_findSNPs.png|thumb|right|500px|Find SNPs function highlighted in red]] | [[File:ExperimentView_findSNPs.png|thumb|right|500px|Find SNPs function highlighted in red]] | ||
An alignment-type experiment in CoGe is created by loading a BAM file. See [[LoadExperiment]] for instruction on how to do this. | |||
Revision as of 19:09, 16 May 2014
CoGe has a built-in SNP finding pipeline! To find SNPs in an existing alignment-type experiment, select the "Find SNPs" analysis tool in the ExperimentView page.
An alignment-type experiment in CoGe is created by loading a BAM file. See LoadExperiment for instruction on how to do this.