Medically Relevant Genomes in CoGe: Difference between revisions
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!|Research Interest Examples | !|Research Interest Examples | ||
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|rowspan=" | |rowspan="15"|Chordata (Vertebrates) | ||
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|rowspan="6"|Mammals | |rowspan="6"|Mammals | ||
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|Vertebrate developmental biology | |Vertebrate developmental biology | ||
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|rowspan=" | |rowspan="4"|Fish | ||
|Zebrafish | |Zebrafish | ||
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=25001 Danio rerio (NCBI)] | |[https://genomevolution.org/coge/GenomeInfo.pl?gid=25001 Danio rerio (NCBI)] | ||
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|[https://genomevolution.org/coge/OrganismView.pl?org_name=cichlid Cichlid species] | |[https://genomevolution.org/coge/OrganismView.pl?org_name=cichlid Cichlid species] | ||
|Craniofacial development disorders | |Craniofacial development disorders | ||
|- | |||
|Mexican tetra (cave fish) | |||
|[https://genomevolution.org/coge/GenomeInfo.pl?gid=25004 Astyanax mexicanus v 1.0.2 (NCBI)] | |||
|[https://genomevolution.org/coge/OrganismView.pl?org_name=astyanax Astyanax versions] | |||
|Eye development and degeneration | |||
|- | |- | ||
|rowspan="4"|Ecdysozoa | |rowspan="4"|Ecdysozoa | ||
Revision as of 00:41, 28 July 2015
List of Genomes
| Phylum | Class | Species | CoGe Genome Link | Related Genomes Available | Research Interest Examples |
|---|---|---|---|---|---|
| Chordata (Vertebrates) | |||||
| Mammals | Human | Homo sapiens v 38 (NCBI) | Homo subspecies | Disease modeling, ecology, genetic variation | |
| Mouse | Mus musculus C57BL/6J v GRCm28.p3 (NCBI) | Mus subspecies | Disease modeling, gene function | ||
| Rat | Rattus norvegicus v 6.0 (Ensembl) | Rattus species | Disease modeling, gene function | ||
| Rabbit | Oryctolagus cuniculus v 2.0 (Ensembl) | Rabbit versions | Pharmaceutical testing, immune response | ||
| Guinea pig | Cavia porcellus inbred line 2N v 3.0 (Ensembl) | Guinea pig versions | Human disease, human immune response, toxicology | ||
| Pig | Sus scrofa v 10.2 (Ensembl) | Sus scrofa versions | |||
| Birds | Chicken | Gallus gallus v 4.74 (Ensembl) | Gallus versions | Agriculture, developmental biology | |
| Zebra Finch | Taeniopygia guttata v 3.2.4 (BGI/Ensembl) | Taeniopygia versions | Learning, neural biology | ||
| Japanese Quail | Coturnix japonica v 1.0 (NCBI) | Agriculture, developmental biology | |||
| Amphibians & Reptiles | Western Clawed Frog (Xenopus) | Xenopus tropicalis v 4.2.64 (Ensembl) | Xenopus species | Vertebrate developmental biology | |
| Fish | Zebrafish | Danio rerio (NCBI) | Danio versions | Vertebrate developmental biology | |
| Medaka | Oryzias latipes v 1.0 (NCBI) | Oryzias versions | Vertebrate developmental biology | ||
| Cichlids | Maylandia zebra v 1.1 (NCBI) | Cichlid species | Craniofacial development disorders | ||
| Mexican tetra (cave fish) | Astyanax mexicanus v 1.0.2 (NCBI) | Astyanax versions | Eye development and degeneration | ||
| Ecdysozoa | |||||
| Insects | Fruit fly | Fruit fly v 6.0 (NCBI) | Drosophila species | Gene function | |
| Platyhelmenthes | [1] | [2] | Vertebrate developmental biology | ||
| Nematodes | (Ensembl) | [3] | Vertebrate developmental biology |