Local alignment: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
[[Image:lcs.png|thumb|500px|right]] | [[Image:lcs.png|thumb|500px|right]] | ||
Local alignment only aligns the most similar regions between | Local alignment algorithms only aligns the most similar regions between sequences. [http://www.wikipedia.org/wiki/Smith-Waterman_algorithm Smith-Waterman] algorithm, a variation of Needleman Wunsch algorithm, is often used for local alignments. Unlike global alignment, only sub-region of sequences is aligned in local alignment. |
Latest revision as of 00:16, 29 September 2009

Local alignment algorithms only aligns the most similar regions between sequences. Smith-Waterman algorithm, a variation of Needleman Wunsch algorithm, is often used for local alignments. Unlike global alignment, only sub-region of sequences is aligned in local alignment.