CoGepedia:Current events: Difference between revisions
Jump to navigation
Jump to search
| Line 3: | Line 3: | ||
The current pseudomolecule assembly of maize has been loaded into CoGe. | The current pseudomolecule assembly of maize has been loaded into CoGe. | ||
*[http://synteny.cnr.berkeley.edu/CoGe/OrganismView.pl?dsgid=8054 | *[http://synteny.cnr.berkeley.edu/CoGe/OrganismView.pl?dsgid=8054 Link to OrganismView for complete set of gene models.] | ||
*[http://synteny.cnr.berkeley.edu/CoGe/OrganismView.pl?dsgid=8053 | *[http://synteny.cnr.berkeley.edu/CoGe/OrganismView.pl?dsgid=8053 Link to OrganismView for filtered gene model set.] | ||
*[http://synteny.cnr.berkeley.edu/CoGe/SynMap.pl?dsgid1=8053;dsgid2=93;D=20;g=10;A=5;w=0;b=1;ft1=1;ft2=1;dt=geneorder;ks=1;autogo=1 Maize-Sorghum syntenic dotplot with syntologs colored by synonymous rate change.] | *[http://synteny.cnr.berkeley.edu/CoGe/SynMap.pl?dsgid1=8053;dsgid2=93;D=20;g=10;A=5;w=0;b=1;ft1=1;ft2=1;dt=geneorder;ks=1;autogo=1 Maize-Sorghum syntenic dotplot with syntologs colored by synonymous rate change.] | ||
*[http://synteny.cnr.berkeley.edu/CoGe/SynMap.pl?dsgid1=8053;dsgid2=8053;D=20;g=10;A=5;w=0;b=1;ft1=1;ft2=1;dt=geneorder;ks=1;autogo=1 Maize-Maize syntenic dotplot with syntologs colored by synoonymous rate change.] | *[http://synteny.cnr.berkeley.edu/CoGe/SynMap.pl?dsgid1=8053;dsgid2=8053;D=20;g=10;A=5;w=0;b=1;ft1=1;ft2=1;dt=geneorder;ks=1;autogo=1 Maize-Maize syntenic dotplot with syntologs colored by synoonymous rate change.] | ||
Revision as of 23:56, 21 October 2009
Maize Pseudomolecule Assembly with Gene Models Released
Oct. 20th 2009
The current pseudomolecule assembly of maize has been loaded into CoGe.
- Link to OrganismView for complete set of gene models.
- Link to OrganismView for filtered gene model set.
- Maize-Sorghum syntenic dotplot with syntologs colored by synonymous rate change.
- Maize-Maize syntenic dotplot with syntologs colored by synoonymous rate change.
CoGe surpasses 7000 organisms in its database!
More fun for everyone!
NCBI Genome Loader Updated
CoGe's automated NCBI genome loader has been updated and is once again checking NCBI regularly for new and updated genomes. You can get a snapshot of the number or organisms and genomic sequence in CoGe by checking its homepage, search for your genome of interest using OrganismView.
CoGe is linked to TARGeT: Tree Analysis of Related Genes and Transposons
You can send a set of fasta sequence generated by FastaView directly to TARGeT.
New version of Gobe release!
Read general announcement Gobe
Version 3 of CoGe is released!
Read general announcement CoGe version 3.