Medically Relevant Genomes in CoGe

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List of Genomes

Phylum Class Species CoGe Genome Link Related Genomes Available Research Interest Examples
Chordata (Vertebrates)
Mammals Human Homo sapiens v 38 (NCBI) Homo subspecies Disease modeling, ecology, genetic variation
Mouse Mus musculus C57BL/6J v GRCm28.p3 (NCBI) Mus subspecies Disease modeling, gene function
Rat Rattus norvegicus v 6.0 (Ensembl) Rattus species Disease modeling, gene function
Rabbit Oryctolagus cuniculus v 2.0 (Ensembl) Rabbit versions Pharmaceutical testing, immune response
Guinea pig Cavia porcellus inbred line 2N v 3.0 (Ensembl) Guinea pig versions Human disease, human immune response, toxicology
Pig Sus scrofa v 10.2 (Ensembl) Sus scrofa versions
Birds Chicken Gallus gallus v 4.74 (Ensembl) [ Agriculture, developmental biology
Zebra Finch Taeniopygia guttata v 3.2.4 (BGI/Ensembl) [ Learning, neural biology
Japanese Quail Coturnix japonica v 1.0 (NCBI) Agriculture, developmental biology
Amphibians & Reptiles Western Clawed Frog (Xenopus) Xenopus tropicalis v 4.2.64 (Ensembl) Xenopus species Vertebrate developmental biology
Fish Zebrafish Danio rerio (NCBI) [1] Vertebrate developmental biology
Ecdysozoa
Insects Fruit fly (Ensembl) [2] Vertebrate developmental biology
Platyhelmenthes Fruit fly [3] [4] Vertebrate developmental biology
Nematodes Fruit fly (Ensembl) [5] Vertebrate developmental biology