Twig2Genome

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Revision as of 07:53, 11 February 2012 by Elyons (Talk | contribs) (Created page with '==Objective== Write a paper on the twig2genome concept: rapidly creating a usable low-quality draft assembly from a complex plant genome. ==Methods== ===Genome assembly=== Cel...')

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Contents

1 Objective
2 Methods
- 2.1 Genome assembly
3 Syntenic path assemlby

Objective

Write a paper on the twig2genome concept: rapidly creating a usable low-quality draft assembly from a complex plant genome.

Methods

Genome assembly

Celera Assembly (Haibao Tang): http://genomevolution.org/CoGe/OrganismView.pl?dsgid=16855

Syntenic path assemlby

To peach:
- SynMap visualization with unassembled contigs: http://genomevolution.org/r/4hzq
- SynMap visualization without unassembled contigs: http://genomevolution.org/r/4i6l

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