Example data for EPIC-CoGe

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Example data for EPIC-CoGe is based on the genome of E. coli. These datasets are relatively small

Fasta file (genome): http://de.iplantcollaborative.org/dl/d/9A58E036-A0C9-4499-9F3D-73F9D2A812EF/genome_7112.faa
GFF file (structural annotations): http://de.iplantcollaborative.org/dl/d/EA6DCAA5-3791-484F-8725-DC0DB6CACF23/7122-structural-annotations.gff
VCF file (variation/SNPs): http://de.iplantcollaborative.org/dl/d/03875F31-5D72-4A4C-BFDA-6F82DA026390/7112-demo.vcf.gz
BAM file (mapped reads): http://de.iplantcollaborative.org/dl/d/6319675C-7FD1-4B83-8D32-1C87AD4EF115/7112-alignment.bam
CSV file (low density expression data): http://de.iplantcollaborative.org/dl/d/9BD6A843-6316-4C4A-B6D4-60ABA9498D52/7112-lo.csv
CSV file (high density expression data): http://de.iplantcollaborative.org/dl/d/CEC021DC-777B-41F8-9D1E-30078EE9FEBE/7112-hi.csv

This short video shows how to load the above data:

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