User contributions for Ambz

26 September 2009

• 00:1100:11, 26 September 2009 diff hist +37 Local alignment No edit summary
• 00:0900:09, 26 September 2009 diff hist +62 N File:Lcs.png Diagram depicting locally aligned sub-regions of DNA sequences current

25 September 2009

• 23:4823:48, 25 September 2009 diff hist +21 Local alignment No edit summary
• 23:4423:44, 25 September 2009 diff hist 0 Local alignment No edit summary
• 23:4423:44, 25 September 2009 diff hist +10 Local alignment No edit summary
• 23:4323:43, 25 September 2009 diff hist +3 Local alignment No edit summary
• 23:4023:40, 25 September 2009 diff hist +51 Local alignment No edit summary
• 23:3723:37, 25 September 2009 diff hist +58 Global alignment No edit summary
• 23:3423:34, 25 September 2009 diff hist +4 Needleman Wunsch No edit summary current
• 23:3323:33, 25 September 2009 diff hist +1 Needleman Wunsch No edit summary
• 23:3223:32, 25 September 2009 diff hist +73 N Needleman Wunsch Created page with '[http://www.en.wikipedia/wiki/Needleman-Wunsch_algorithm.com Wikipedia!!]'
• 23:3023:30, 25 September 2009 diff hist −285 Local alignment No edit summary
• 23:2423:24, 25 September 2009 diff hist +1 Needleman-Wunsh No edit summary current
• 23:2323:23, 25 September 2009 diff hist +60 N Needleman-Wunsh Created page with '[http://www.en.wikipedia.org/wiki/Needleman-Wunsh_algorithm]'
• 23:2123:21, 25 September 2009 diff hist −316 Global alignment No edit summary
• 23:1523:15, 25 September 2009 diff hist +239 N E-value Created page with 'E-value or expected value is the probability of obtaining a given result solely by chance. In this way, e-values statistically validate the results of an experiment by determinin...'
• 22:5522:55, 25 September 2009 diff hist +47 Score No edit summary current
• 22:5222:52, 25 September 2009 diff hist −6 Local alignment No edit summary
• 22:5122:51, 25 September 2009 diff hist +309 N Score Created page with 'A score is a weight that is assigned from a scoring matrix to the output of an operation. A scoring matrix is formulated based on some parameter which could be altered to vary a ...'
• 22:2622:26, 25 September 2009 diff hist +22 Local alignment No edit summary
• 22:2422:24, 25 September 2009 diff hist +317 Local alignment No edit summary
• 22:1222:12, 25 September 2009 diff hist +1 Global alignment No edit summary
• 22:1222:12, 25 September 2009 diff hist +1 Global alignment No edit summary
• 22:1122:11, 25 September 2009 diff hist +1 Global alignment No edit summary
• 22:1122:11, 25 September 2009 diff hist +3 Global alignment No edit summary

24 September 2009

• 21:4721:47, 24 September 2009 diff hist 0 Glossary →Methodology
• 16:0116:01, 24 September 2009 diff hist +4 Global alignment No edit summary
• 16:0016:00, 24 September 2009 diff hist +661 N Homologs Created page with 'Genomic regions and features that share a common ancestry. Although there are different definitions of this term, for comparative genomics work, this definition is the simplest. ...' current
• 15:5915:59, 24 September 2009 diff hist +4 Local alignment No edit summary
• 06:3406:34, 24 September 2009 diff hist −24 Glossary →Genomic Evolution Terminology
• 06:2106:21, 24 September 2009 diff hist +41 Global alignment No edit summary
• 06:1606:16, 24 September 2009 diff hist +267 N Local alignment Created page with 'Local-local alignment is best for detecting remote homologs and identifying evolutionary conserved domains. The matches may have variable lengths and share only partial similarit...'
• 06:1006:10, 24 September 2009 diff hist +563 N Global alignment Created page with 'In the process of global alignment, a DNA or a query sequence dictates the length of putative homologs. Based on sequence similarity to query, the top matches are generated by a ...'

21 September 2009

• 23:5823:58, 21 September 2009 diff hist +129 Out-Paralog No edit summary
• 23:5623:56, 21 September 2009 diff hist −7 In-Paralog No edit summary
• 23:5523:55, 21 September 2009 diff hist +6 In-Paralog No edit summary
• 23:5423:54, 21 September 2009 diff hist +6 In-Paralog No edit summary
• 23:5323:53, 21 September 2009 diff hist +124 In-Paralog No edit summary
• 23:4823:48, 21 September 2009 diff hist +73 Ortholog No edit summary
• 23:4723:47, 21 September 2009 diff hist +56 Ortholog No edit summary
• 23:4323:43, 21 September 2009 diff hist +92 N File:Otu.png Diagram depicting evolutionary relationship between orthologs, out-paralogs and in-paralogs. current
• 19:0719:07, 21 September 2009 diff hist +461 N In-Paralog Created page with 'Genes arising from gene duplication in given specie without any intervening speciation event. Paralogous genes tend to have different functions and contribute to the overall gene...'
• 19:0319:03, 21 September 2009 diff hist +100 N Out-Paralog Created page with 'Pair(s) of homologous genes resulting after a duplication event and dispersing in different species.'

16 September 2009

• 23:4223:42, 16 September 2009 diff hist +1 Protein alignment No edit summary current
• 23:4023:40, 16 September 2009 diff hist +403 N Protein alignment Created page with ' It is a process where the amino acid sequences between two proteins are aligned and the extent of similarity is determined between the two. It is a useful way of determinin...'
• 23:3423:34, 16 September 2009 diff hist +387 N DNA alignment Created page with 'It is a process of aligning base pairs in one sequence with those of the other sequence often to look for similarities between the two. DNA base pair alignment is useful for dete...'
• 23:3223:32, 16 September 2009 diff hist −2 Glossary →Genomic Evolution Terminology
• 23:3123:31, 16 September 2009 diff hist +10 Glossary No edit summary
• 23:3023:30, 16 September 2009 diff hist +37 Glossary No edit summary
• 23:2723:27, 16 September 2009 diff hist +843 N Dotplot Created page with 'Dot plots are used to determine the percent similarity between two protein sequences. A short segment of one sequence also called window size, is compared with all possible segme...'