Synteny: Getting the Big Picture

Background Information

Objective:  To have you learn about Syntenic Dotplots while generating one.

Difficulty:  Easy

Estimated Time:  5 minutes

New Programs Used:  SynMap

Lesson

Introduction

     The image to the right is a syntenic dotplot.  This lesson teaches what a syntenic dotplot is, how it is used, and why it is useful.  You will also learn how to create a syntenic dotplot through SynMap.

Syntenic Dotplots

     Syntenic Dotplots compare two genomes to eachother.  In the picture to the right the green dots show homologous regions, regions where there a similar genes.

See Also

Previous Lecture:  Computationally Comparing Different Genomes

Next Lecture: 

All Lectures:  Tutorial for High School Students