CoGe v5

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== Updating database: ==

Overview: Major changes to have the database is structured.

  • added section for experiment metadata
  • updated how lists of data are managed in the system
  • updated how user_groups connect to data (all through lists)


Step-by-step modifications:

Modules

Additions

  • ExperimentListConnector.pm
  • GenomeListConnector.pm
  • FeatureListConnector.pm

Deleted

  • ListConnector.pm
  • Sequence.pm
  • SequenceType.pm
  • Quantitation.pm
  • QuantitationExperiment.pm
  • UserGroupDataConnector.pm

Modified

  • Experiment.pm: deleted column "link"
  • ExperimentAnnotation.pm added column "link"
  • Feature.pm: delete relationship to sequences
  • Feature.pm: delete relationship to quantiations
  • Feature.pm: deleted sub seqs


  • experiment_list_connector
  • genome_list_connector
  • feature_list_connector
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