Syntenic dotplot

Variation observed in B and K12	Description of variation	Link leading to GEvo
1. Deletion in B strain	DNA pol II, genes in metabolic pathway, thiamine ABC transporter present in K12 strain Transposase in K12 strain. Prophage CP46 DNA insertion in K12 strain.	http://tinyurl.com/yexrzpb
2. Insertions in K12 strain	Transposase in K12 strain. Prophage CP46 DNA insertion in K12 strain.	http://tinyurl.com/yd2quy7
3. Deletion in B strain or Insertion in K12 strain	Presence of lac operon and other metabolic enzymes genes in K12 strain. Pseudogene made by transposone insertion in K12.	http://tinyurl.com/yedn5tb
4. Insertion in B strain and DNA duplication event in K12.	Prophage DNA insertion in B strain. Recent DNA duplication event in K12 as seen by 100% identity between paralogs.	http://tinyurl.com/yea8bu6
5. Insertion in B strain	Bacteriophage DNA insertion in B strain	http://tinyurl.com/yevlb2w
6. Insertion in B strain	Prophage DNA insertion in B strain	http://tinyurl.com/ybokuag
7. Insertion in K12 strain	Prophage DNA insertion in K12	http://tinyurl.com/yaxlh7o
8. Insertion of transposon in K12 and B strain. Deletion of phenylacetic acid genes in B strain or insertion of those in K12.	Rac prophage DNA insertion in K12. Insertion of IS3 element protein and transposase in B strain. Insertion of IS30 transposon in B strain created pseudogene. Presence of phenylacetic acid degradation genes in K12	http://tinyurl.com.ye7wcxe
9. Insertion in K12 strains. Flagella synthesizing genes either deleted in B strain or inserted in K12.	Presence of flagella encoding/regulatory genes in K12. IS5 sequence insertion in K12. CP4-44 prophage DNA insertion in K12.	http://tinyurl.com/ybh84x7
10. Insertion in B strain. Pili associated genes and metal resistance genes either inserted in K12 or deleted in B strain.	Bacteriophage DNA insertion in B strain. IS1 sequence insertion in B strain. Presence of pili associated genes in K12 together with genes conferring resistance to Co and Ni.	http://tinyurl.com/yammj7v
11. Insertion in K12 strain. ParB family protein and recombinase deleted in K12.	CP4-57 prophage DNA insertion in K12 strain. Presence of ParB family protein gene and recombinase in B strain	http://tinyurl.com/ycdog2c
12. Insertion in B and K12 strain. Inversion. Insertion of saframycin synthetase in B strain or deletion of that in K12.	Prophage DNA insertion in B strain. Inversion of prepilin leader peptidase/methylase and M-type protein. Is5 insertion in K12. Presence of saframycin synthetase gene in B strain.	http://tinyurl.com/ycoagxh
13. Insertion of transposon, ShiA-like, TrbC-like proteins in B strain.	IS30 transposon insertion in B strain. Presence of ShiA-like and TrbC-like protein in B strain	http://tinyurl.com/ydkrcv8
14. Insertion in B strain	Insertion of fimbriae synthesis genes, multi drug transporters, Is1 protein gene in B strain.	http://tinyurl.com/ycwsmsl