Difference between revisions of "CoGeBlast"

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{{ infobox Application
 
{{ infobox Application
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| logo = [[Image:CoGeBlast-logo.png]]
 
| developer = CoGe Team
 
| developer = CoGe Team
 
| analysis = Blast query sequences against genomes stored in CoGe database
 
| analysis = Blast query sequences against genomes stored in CoGe database
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CoGeBlast is CoGe's interface to BLAST (Basic Local Alignment Search Tool) and other related algorithms. With CoGeBlast, one can take any query sequence, whether user submitted or requested from the CoGe database, and compare it against any number of genomes in the CoGe database.&nbsp;
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CoGeBlast is CoGe's interface to BLAST (Basic Local Alignment Search Tool) and other related algorithms. With CoGeBlast, one can take any query sequence, whether user submitted or requested from the CoGe database, and compare it against any number of genomes in the CoGe database.

Revision as of 20:23, 2 March 2009

CoGeBlast
CoGeBlast-logo.png
Software companyCoGe Team
Analysis TypeBlast query sequences against genomes stored in CoGe database
Working stateReleased
Tools Utilizedblastn, tblastn, tblastx, blastz
Websitehttp://synteny.cnr.berkeley.edu/CoGe/CoGeBlast.pl

CoGeBlast is CoGe's interface to BLAST (Basic Local Alignment Search Tool) and other related algorithms. With CoGeBlast, one can take any query sequence, whether user submitted or requested from the CoGe database, and compare it against any number of genomes in the CoGe database.