View source for Phaseolus vulgaris v. Glycine max

==[[Syntenic dotplot]] between Phaseolus and Glycine with [[syntenic gene pairs]] colored by [[synonymous mutation]] values:==

[[File:Screen shot 2012-08-23 at 8.41.55 AM.png]]

==[[Ks histogram]] of syntenic gene pairs:==

[[File:Master 1611 19521.CDS-CDS.last.dag.all.go D20 g10 A5.aligncoords.gcoords ct0.w1000.gene.ks.sr.cs1.csoN.min-1.log.nsd.hist.png]]

==Summary==
There clearly exists several populations of syntenic gene pairs.  An [[orthologous]] set (dark blue lines) that are represented in two copies in Glycine (indicative a [[whole genome duplication]] event in that lineage subsequent to the divergence of these lineages); an [[out-paralogous]] set (purple) derived from a shared whole genome duplication event in their lineage, and an older out-paralogous set (light blue) that is likely from the [[eudicot paleohexaploidy]] event.

Results may be regenerated: http://genomevolution.org/r/58rk