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Date Name Thumbnail Size Description Versions
16:05, 16 January 2014 New01.gif (file) 522 B   1
16:09, 16 January 2014 Rotating new.gif (file) 2 KB   1
16:06, 16 January 2014 New.gif (file) 2 KB   1
16:05, 16 January 2014 New0oo.gif (file) 2 KB   1
23:39, 12 April 2010 Master 3419 3420.CDS-CDS.blastn.dag.go c4 D20 g10 A5.aligncoords.gcoords ctinv.w500.png (file) 3 KB Syntenic dotplot of Archaeas Thermoplasma acidophilum strain DSM 1728 (x-axis) and Thermoplasma volcanium strain GSS1 (y-axis). http://genomevolution.org/CoGe/SynMap.pl?dsgid1=3419;dsgid2=3420;c=4;D=20;g=10;A=5;Dm=0;gm=0;w=0;b=1;ft1=1;ft2=1;do1=1;do2=1;d 1
16:01, 5 March 2010 Master 4822 4827.CDS-CDS.blastn.dag.go c4 D20 g10 A5.aligncoords.Dm0.ma1.qac1.1.40.gcoords ctinv.w500.box.png (file) 4 KB http://synteny.cnr.berkeley.edu/CoGe/SynMap.pl?dsgid1=4822;dsgid2=4827;c=4;D=20;g=10;A=5;Dm=0;gm=0;w=0;b=1;ft1=1;ft2=1;bd=1;ma=1;da=1;do1=1;do2=1;do=40;dt=geneorder;ct=inv 1
18:32, 25 August 2010 5251 5249 min CDS gc.png (file) 4 KB Schizosaccharomyces pombe 972h (http://genomevolution.org/CoGe/OrganismView.pl?dsgid=1483) histogram of percent GC content of protein coding sequence. 1
14:48, 22 September 2016 Screen Shot 2016-09-22 at 1.48.43 PM.png (file) 4 KB   1
18:33, 25 August 2010 5251 5249 wobble gc.png (file) 4 KB Schizosaccharomyces pombe 972h (http://genomevolution.org/CoGe/OrganismView.pl?dsgid=1483) histogram of percent GC in codon wobble position of protein coding sequence. 1
18:26, 25 August 2010 41589 min CDS gc.png (file) 4 KB Schizosaccharomyces japonicus strain yFS275 (http://genomevolution.org/CoGe/OrganismView.pl?oid=30548) histogram of percent GC content of protein coding sequence. 1
18:26, 25 August 2010 41589 wobble gc.png (file) 4 KB Schizosaccharomyces japonicus strain yFS275 (http://genomevolution.org/CoGe/OrganismView.pl?oid=30548) histogram of percent GC in codon wobble position of protein coding sequence. 1
18:33, 25 August 2010 5251 5249 wobble gc diff.png (file) 5 KB Schizosaccharomyces pombe 972h (http://genomevolution.org/CoGe/OrganismView.pl?dsgid=1483) histogram of percent GC content - percent GC content of wobble codon position of protein coding sequence. 1
14:02, 21 August 2010 Master 6989 3415.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ctinv.w500.37423447.33394801.png (file) 5 KB Syntenic dotplot generated by SynMap between two species of Thermococcus: gammatolerans strain DSM 15229; EJ3 (x-axis); onnurineus strain NA1 (y-axis). Results can be regenerated at: http://genomevolution.org/r/os7 1
17:53, 9 May 2012 Master 16909 16909.CDS-CDS.last.dag.all.go D80 g40 A4.aligncoords.gcoords ct0.w800.ass2.gene.s.ks.sr.cs1.csoS.log.nsd.png (file) 5 KB http://genomevolution.org/r/4s30 1
18:27, 25 August 2010 41589 wobble gc diff.png (file) 5 KB Schizosaccharomyces japonicus strain yFS275 (http://genomevolution.org/CoGe/OrganismView.pl?oid=30548) histogram of percent GC content - percent GC content of wobble codon position of protein coding sequence. 1
14:27, 21 August 2010 Master 6948 6963.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ctinv.w500.png (file) 5 KB Syntenic dotplot generated by SynMap between two strains of Sulfolobus islandicus: M.14.25 (x-axis); Y.G.57.14 (y-axis). Results can be regenerated at: http://genomevolution.org/r/osn 1
16:07, 16 January 2014 New-anim.gif (file) 5 KB   1
22:06, 21 January 2010 Master 2361 2360.CDS-CDS.blastn geneorder D20 g10 A5.w500.png (file) 5 KB Syntenic dotplot by SynMap between strains of Shewanella baltica. http://synteny.cnr.berkeley.edu/CoGe/SynMap.pl?dsgid1=2361;dsgid2=2360;D=20;g=10;A=5;w=0;b=1;ft1=1;ft2=1;dt=geneorder 1
08:57, 7 July 2012 Master 8156 8156.CDS-CDS.last.dag.all.go D20 g10 A5.aligncoords.qac1.1.40.gcoords ct0.w800.gene.s.ks.sr.cs1.csoS.log.nsd.hist.png (file) 5 KB http://genomevolution.org/r/51v5 1
16:08, 16 January 2014 New2.gif (file) 5 KB   1
08:50, 7 July 2012 Master 8156 8156.CDS-CDS.last.dag.all.go D20 g10 A5.aligncoords.gcoords ct0.w800.ass.gene.s.ks.sr.cs1.csoS.log.nsd.hist.png (file) 5 KB http://genomevolution.org/r/51v0 1
22:01, 12 April 2010 42188 42187 42186 42185 42184 42183 42182 42181 42180 42179 42178 42177 42176 42175 42174 42173 42172 42171 42170 42169 42168 42167 42166 42165 42164 42163 42162 min CDS gc.png (file) 5 KB Aspergillus oryzae strain RIB 40 protein coding sequence GC content histogram. Counts are per sequences and binned according to their GC content. http://synteny.cnr.berkeley.edu/CoGe/OrganismView.pl?dsgid=8171 1
14:41, 21 August 2010 Master 6946 6963.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ctinv.w500.png (file) 5 KB Syntenic dotplot generated by SynMap between two strains of Sulfolobus islandicus: strain L.S.2.15 (x-axis); strain Y.G.57.14 (y-axis). Results can be regenerated at: http://genomevolution.org/r/osp 1
16:44, 25 August 2010 Master 7763 1483.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ct0.w1200.ks.hist.png (file) 5 KB Histogram of synonymous mutation rates for syntenic gene pairs identified between the Schizosaccharomyces fungi: japonicus strain yFS275 and pombe 972h. http://genomevolution.org/r/pi4 1
10:11, 4 August 2010 Master 10179 10179.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ct0.w2000.ks.hist.png (file) 5 KB Histogram of Ks values for syntenic gene pairs identified between Brassica rapa and itself. Colors in this histogram match colors in the syntenic dotplot. http://genomevolution.org/r/ntv 1
15:25, 4 February 2011 Master 8400 10997.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ct0.w2000.ks.cs1.nsd.hist.png (file) 5 KB Histogram of synonymous mutation changes between syntenic gene pairs of chocolate and peach. Generated by SynMap: http://genomevolution.org/r/2i7f 1
10:36, 4 August 2010 Master 7043 10179.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ct0.w2000.ass.ks.hist.png (file) 5 KB Histogram of Ks values between Brassica rapa and Arabidopsis thaliana. Ks values are log transformed, low values on left (little change); high values on right (more change). Peaks correspond to genome duplication events. Colors in this histogram match co 1
08:43, 7 July 2012 Master 8156 12289.CDS-CDS.last.dag.all.go D20 g10 A5.aligncoords.qac1.1.40.gcoords ct0.w800.gene.s.ks.sr.cs1.csoS.min-.4.max1.log.nsd.hist.png (file) 5 KB http://genomevolution.org/r/51uw 1
08:48, 7 July 2012 Master 8156 8156.CDS-CDS.last.dag.all.go D20 g10 A5.aligncoords.gcoords ct0.w800.ass.gene.s.ks.sr.cs1.csoS.min-0.4.log.nsd.hist.png (file) 5 KB http://genomevolution.org/r/51ux 1
10:24, 3 October 2012 Master 19558 2731.CDS-CDS.last.dag.all.go D20 g10 A3.aligncoords.gcoords ct0.w1000.spa1.ks.sr.cs1.csoS.log.nsd.hist.png (file) 5 KB http://genomevolution.org/r/5ec3 1
09:47, 23 August 2012 Master 1611 19521.CDS-CDS.last.dag.all.go D20 g10 A5.aligncoords.gcoords ct0.w1000.gene.ks.sr.cs1.csoN.min-1.log.nsd.hist.png (file) 5 KB http://genomevolution.org/r/58rk 1
08:53, 7 July 2012 Master 12289 12289.CDS-CDS.lastz.dag.all.go D20 g10 A5.aligncoords.Dm80.ma1.qac1.1.20.gcoords ct0.w1000.gene.ks.sr.cs1.csoN.log.nsd.hist.png (file) 5 KB http://genomevolution.org/r/51v4 1
08:23, 7 July 2012 Master 8156 12289.CDS-CDS.last.dag.all.go D20 g10 A5.aligncoords.gcoords ct0.w800.ass.gene.s.ks.sr.cs1.csoS.min-0.4.log.nsd.hist.png (file) 5 KB http://genomevolution.org/r/51li 1
13:30, 21 August 2010 Master 10344 4385.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ctinv.w500.8472575.71771618.png (file) 5 KB Syntenic dotplot of Betaproteobacteri Herbaspirillum seropedicae strain SmR1 (x-axis) and Herminiimonas arsenicoxydans (y-axis). Results can be regenerated at: http://genomevolution.org/r/orm 1
09:11, 28 September 2012 Master 16886 16886.CDS-CDS.lastz.dag.all.go D20 g10 A3.aligncoords.gcoords ct0.w1000.gene.s.ks.sr.cs1.csoS.log.nsd.hist.png (file) 5 KB http://genomevolution.org/r/5cuk 1
09:11, 1 June 2012 Master 12289 9048.CDS-CDS.lastz.dag.all.go D20 g10 A5.aligncoords.gcoords ct0.w1000.gene.s.ks.sr.cs7.csoN.min-.3.max1.log.nsd.hist.png (file) 6 KB http://genomevolution.org/r/4tpo 1
08:38, 7 July 2012 Master 8156 12289.CDS-CDS.last.dag.all.go D20 g10 A5.aligncoords.qac1.1.40.gcoords ct0.w800.gene.s.ks.sr.cs1.csoS.min-.4.log.nsd.hist.png (file) 6 KB http://genomevolution.org/r/51uv 1
15:41, 16 October 2014 Screen Shot 2014-10-16 at 2.28.47 PM.png (file) 6 KB   1
22:02, 12 April 2010 42188 42187 42186 42185 42184 42183 42182 42181 42180 42179 42178 42177 42176 42175 42174 42173 42172 42171 42170 42169 42168 42167 42166 42165 42164 42163 42162 wobble gc.png (file) 6 KB Aspergillus oryzae strain RIB 40 protein coding sequence GC3 (codon wobble position) content histogram. Counts are per sequences and binned according to the GC content of their GC3 codon wobble position. http://synteny.cnr.berkeley.edu/CoGe/OrganismView.p 1
08:44, 7 July 2012 Master 8156 12289.CDS-CDS.last.dag.all.go D20 g10 A5.aligncoords.qac1.1.40.gcoords ct0.w800.gene.s.ks.sr.cs1.csoS.log.nsd.hist.png (file) 6 KB http://genomevolution.org/r/51uu 1
08:27, 7 July 2012 Master 12289 12289.CDS-CDS.lastz.dag.all.go D20 g10 A5.aligncoords.gcoords ct0.w1000.gene.ks.sr.cs1.csoN.log.nsd.hist.png (file) 6 KB   1
14:32, 21 August 2010 Master 8988 6963.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ctinv.w500.png (file) 6 KB Syntenic dotplot generated by SynMap between two strains of Sulfolobus islandicus: L.D.8.5 (x-axis); Y.G.57.14 (y-axis). Results can be regenerated at: http://genomevolution.org/r/oso 1
08:55, 7 July 2012 Master 12289 12289.CDS-CDS.lastz.dag.all.go D20 g10 A5.aligncoords.Dm80.ma1.qac1.1.20.gcoords ct0.w1000.gene.ks.sr.cs1.csoN.min-.4.max1.log.nsd.hist.png (file) 6 KB http://genomevolution.org/r/51v6 1
17:16, 23 January 2012 Master 16737 9048.CDS-CDS.lastz.dag.all.go D20 g10 A4.aligncoords.gcoords ct0.w1000.ass.ks.sr.cs1.csoS.min-.3.log.nsd.hist.png (file) 6 KB Histogram of log10 transformed Ks values of syntenic gene pairs identified between amborella and grape. http://genomevolution.org/r/4fa0 1
13:36, 21 August 2010 Master 4385 4397.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ctinv.w500.8472575.25239415.png (file) 6 KB Syntenic dotplot generated by SynMap of Oxalobacteraceae Herminiimonas arsenicoxydans (x-axis) and Janthinobacterium sp. strain Marseille (y-axis). Results can be regenerated at: http://genomevolution.org/r/orn 1
18:18, 9 September 2010 Master 6807 8082.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ct0.w1200.gene.ks.hist.png (file) 6 KB Histogram of synonymous mutation values generated by SynMap for syntenic genes between maize and sorghum. http://genomevolution.org/r/bay 1
08:28, 7 July 2012 Master 8156 12289.CDS-CDS.last.dag.all.go D20 g10 A5.aligncoords.gcoords ct0.w800.ass.gene.s.ks.sr.cs1.csoS.min-0.2.max1.log.nsd.hist.png (file) 6 KB http://genomevolution.org/r/51up 1
08:57, 7 July 2012 Master 8156 8156.CDS-CDS.last.dag.all.go D20 g10 A5.aligncoords.qac1.1.40.gcoords ct0.w800.gene.s.ks.sr.cs1.csoS.min-1.max1.log.nsd.hist.png (file) 6 KB http://genomevolution.org/r/51v3 1
08:51, 7 July 2012 Master 8156 8156.CDS-CDS.last.dag.all.go D20 g10 A5.aligncoords.gcoords ct0.w800.ass.gene.s.ks.sr.cs1.csoS.min-1.max1.log.nsd.hist.png (file) 6 KB http://genomevolution.org/r/51v1 1
19:45, 20 June 2010 Master 4242 7458.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ct0.w500.24862786.48121174.png (file) 6 KB Syntenic dotplot by SynMap of two sub-strains of E. coli K12: Bw2952 and MG1655. http://genomevolution.org/r/8fw 1
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