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Organisms:
1
}
Beta vulgaris (id38425)
Organism Information
Name:
Beta vulgaris
Description:
cellular organisms
;
Eukaryota
;
Viridiplantae
;
Streptophyta
;
Streptophytina
;
Embryophyta
;
Tracheophyta
;
Euphyllophyta
;
Spermatophyta
;
Magnoliophyta
;
eudicotyledons
;
core eudicotyledons
;
Caryophyllales
;
Amaranthaceae
;
Beta
;
;
Tools:
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Genomes:
6
Beta vulgaris (vEL10_1.0, id54674): FASTA
Beta vulgaris (EL10.2): EL10.2 is derived from the base PacBio + BioNano assembly used to create the EL10.1 assembly. EL10.2 differs in that ~200M HiC reads were used by Dovetail Genomics in their assembly pipeline versus ~50M HiC reads from Phase Genomics' scaffolding pipeline. (vEL10.2-PO1197, id57232): unmasked
Beta vulgaris: EL10.1 sugar beet assembly deposited in NCBI BioProject PRJNA413079; Assembly GCA_002917755.1; WGS Project PCNB01. Scaffold assemblies are listed independently: NCBI Accessions CM009438 through CM009446. (vEL10.1_final, id54615): FASTA
Beta vulgaris (v2, id66685): unmasked
Beta vulgaris: Beta vulgaris (sugar beet) genome version 1.2 with all predicted, unfiltered genes annotated. File name: RefBeet-1.2.fna.gz (v1.2, id26291): unmasked
Beta vulgaris (v1.0, id25779): unmasked
Genome Information
Description:
EL10.1 sugar beet assembly deposited in NCBI BioProject PRJNA413079; Assembly GCA_002917755.1; WGS Project PCNB01. Scaffold assemblies are listed independently: NCBI Accessions CM009438 through CM009446.
Genome ID:
54615
Sequence type:
FASTA : fasta with N gaps (gstid56)
Owner:
Mitch Mcgrath
Length:
540,537,112 bp
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Datasets:
1
genome.faa(vEL10_1.0, id132557)
Dataset Information
Name:
genome.faa (id132557)
Source:
Mitch McGrath - USDA sugar beet (id2385)
Version:
EL10_1.0
Organism:
Beta vulgaris
Created:
2019-11-27 14:11:00
Chromosomes:
40
Total length:
540,537,112 bp
Tools:
OrganismView
Chromosomes:
1_EL10.1 (58,086,001 bp)
Scaf_01_EL10.1 (2,519,862 bp)
2_EL10.1 (54,971,872 bp)
Scaf_02_EL10.1 (2,420,327 bp)
3_EL10.1 (54,100,447 bp)
Scaf_03_EL10.1 (1,921,869 bp)
4_EL10.1 (61,163,185 bp)
Scaf_04_EL10.1 (1,802,165 bp)
5_EL10.1 (59,224,585 bp)
Scaf_05_EL10.1 (1,679,391 bp)
6_EL10.1 (65,096,967 bp)
Scaf_06_EL10.1 (1,639,599 bp)
7_EL10.1 (57,353,724 bp)
Scaf_07_EL10.1 (1,327,247 bp)
8_EL10.1 (57,938,902 bp)
Scaf_08_EL10.1 (1,116,489 bp)
9_EL10.1 (52,180,088 bp)
Scaf_09_EL10.1 (912,454 bp)
Scaf_10_EL10.1 (511,739 bp)
Scaf_11_EL10.1 (457,683 bp)
Scaf_12_EL10.1 (413,183 bp)
Scaf_13_EL10.1 (378,582 bp)
Scaf_14_EL10.1 (366,083 bp)
Scaf_15_EL10.1 (344,704 bp)
Scaf_16_EL10.1 (282,902 bp)
Scaf_17_EL10.1 (281,078 bp)
Scaf_18_EL10.1 (278,623 bp)
Scaf_19_EL10.1 (267,222 bp)
Scaf_20_EL10.1 (264,226 bp)
Scaf_21_EL10.1 (232,983 bp)
Scaf_22_EL10.1 (195,802 bp)
Scaf_23_EL10.1 (155,017 bp)
Scaf_24_EL10.1 (136,997 bp)
Scaf_25_EL10.1 (135,273 bp)
Scaf_26_EL10.1 (131,654 bp)
Scaf_27_EL10.1 (130,158 bp)
Scaf_28_EL10.1 (91,000 bp)
Scaf_29_EL10.1 (14,771 bp)
Scaf_30_EL10.1 (11,875 bp)
Scaf_31_EL10.1 (383 bp)
Chromosome Information
Chromosome ID:
1_EL10.1
Nucleotides:
58,086,001 bp
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