Difference between revisions of "Nelumbo v. Aquilegia"
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| − | [[File:Screen shot 2012-04-09 at 5.40.43 PM.png|thumb|center|800px|[[ | + | [[File:Screen shot 2012-04-09 at 6.04.44 PM.png|thumb|center|800px|[[SynMap]] [[syntenic dotplot]] of Aguilegia (x-axis) v. Nelumbo (y-axis). Aguilegia contigs have been ordered and oriented to Nelumo by the [[syntenic path assembly]]. Syntenic gene paris are colored by Ks values. Note the 2:2 [[syntenic depth]] between these genomes and the similar color of (Ks values) of syntenic gene pairs. This is evidence for independent [[tetraploidy]] events in the two lineages. Results may be regenerated at: http://genomevolution.org/r/4pa4]] |
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| + | [[File:Screen shot 2012-04-09 at 5.40.43 PM.png|thumb|center|800px|[[GEvo]] analysis of syntenic regions in Nelumbo and Aquilegia. Note that all regions are [[fractionated]] with respect to one another; and no two pairs between Nelumbo and Aquilegia are more similar to one another (evidence for [[orthology]] and a [[shared tetraploidy]]). Results may be regenerated at: http://genomevolution.org/r/4p9s]] | ||
Latest revision as of 19:07, 9 April 2012
SynMap syntenic dotplot of Aguilegia (x-axis) v. Nelumbo (y-axis). Aguilegia contigs have been ordered and oriented to Nelumo by the syntenic path assembly. Syntenic gene paris are colored by Ks values. Note the 2:2 syntenic depth between these genomes and the similar color of (Ks values) of syntenic gene pairs. This is evidence for independent tetraploidy events in the two lineages. Results may be regenerated at: http://genomevolution.org/r/4pa4
GEvo analysis of syntenic regions in Nelumbo and Aquilegia. Note that all regions are fractionated with respect to one another; and no two pairs between Nelumbo and Aquilegia are more similar to one another (evidence for orthology and a shared tetraploidy). Results may be regenerated at: http://genomevolution.org/r/4p9s
