Non-X-alignments: Difference between revisions

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[[Image:7603 8665.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords.1-1.w800.ct inv.png|thumb|right|500px|Syntenic dotplot generated by SynMap between two species of Methanocaldococcus: Methanocaldococcus fervens strain AG86 (x-axis); Methanocaldococcus sp. strain FS406-22 (y-axis). Results can be regenerated at: http://genomevolution.org/r/oro]]
[[Image:7603 8665.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords.1-1.w800.ct inv.png|thumb|right|500px|Syntenic dotplot generated by SynMap between two species of Methanocaldococcus: Methanocaldococcus fervens strain AG86 (x-axis); Methanocaldococcus sp. strain FS406-22 (y-axis). Results can be regenerated at: http://genomevolution.org/r/oro]]
[[Image:Master 6989 3415.CDS-CDS.lastz.dag.go c4 D20 g10 A5.aligncoords.gcoords ctinv.w500.37423447.33394801.png|thumb|right|500px|Syntenic dotplot generated by SynMap between two species of Thermococcus: gammatolerans strain DSM 15229; EJ3 (x-axis); onnurineus strain NA1 (y-axis). Results can be regenerated at: http://genomevolution.org/r/os7]]

Revision as of 20:03, 21 August 2010

This tracks examples of bacteria and archaea syntenic dotplots which do not show the classical x-alignment pattern of inversions.

Syntenic dotplot generated by SynMap between two species of Methanocaldococcus: Methanocaldococcus fervens strain AG86 (x-axis); Methanocaldococcus sp. strain FS406-22 (y-axis). Results can be regenerated at: http://genomevolution.org/r/oro
Syntenic dotplot generated by SynMap between two species of Thermococcus: gammatolerans strain DSM 15229; EJ3 (x-axis); onnurineus strain NA1 (y-axis). Results can be regenerated at: http://genomevolution.org/r/os7