Brassica oleracea v. Arabidopsis thaliana: Difference between revisions

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[[File:Screen shot 2012-04-18 at 10.53.29 AM.png|thumb|center|800px|[[SynMap]] [[syntenic dotplot]] of A. thaliana (x-axis) v. B. oleracea (y-axis).  Syntenic gene pairs colored by [[synonymous mutation]] values.  Pink regions are younger than blue regions and represent [[orthologous]] and [[out-paralogs]] regions respecitvely.  Note the 1:3 [[syntenic depth]] between orthologous A. thaliana and B. oleracea. Results may be regenerated at: http://genomevolution.org/r/4qe9]]
[[File:Screen shot 2012-04-18 at 10.53.29 AM.png|thumb|center|800px|[[SynMap]] [[syntenic dotplot]] of A. thaliana (x-axis) v. B. oleracea (y-axis).  Syntenic gene pairs colored by [[synonymous mutation]] values.  Pink regions are younger than blue regions and represent [[orthologous]] and [[out-paralogs]] regions respecitvely.  Note the 1:3 [[syntenic depth]] between orthologous A. thaliana and B. oleracea. Results may be regenerated at: http://genomevolution.org/r/4qe9]]
[[File:Screen shot 2012-04-18 at 11.01.03 AM.png|thumb|center|800px|[[SynMap]] [[syntenic dotplot]] of A. thaliana (x-axis) v. B. oleracea (y-axis), screened forfor a 1:3 Arabidopsis thaliana to Brassica oleracea [[syntenic depth]].  This method, performed by [[quota align]], identifies most of the [[orthologous]] [[syntenic gene-pairs]].  Results may be regenerated at http://genomevolution.org/r/4qg2 ]]

Latest revision as of 18:03, 18 April 2012

SynMap syntenic dotplot of A. thaliana (x-axis) v. B. oleracea (y-axis). Syntenic gene pairs colored by synonymous mutation values. Pink regions are younger than blue regions and represent orthologous and out-paralogs regions respecitvely. Note the 1:3 syntenic depth between orthologous A. thaliana and B. oleracea. Results may be regenerated at: http://genomevolution.org/r/4qe9
SynMap syntenic dotplot of A. thaliana (x-axis) v. B. oleracea (y-axis), screened forfor a 1:3 Arabidopsis thaliana to Brassica oleracea syntenic depth. This method, performed by quota align, identifies most of the orthologous syntenic gene-pairs. Results may be regenerated at http://genomevolution.org/r/4qg2
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