Table of syntenic depth measurements of potato versus Utricularia and Genlisea:
Parameters
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Results
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Window size: 10
Cutoff: 0.1%
(One syntenic genes in a span of 10 genes)
http://genomevolution.org/r/4nfz
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Genlisea aurea Depth 1 5196 of 5705 91.08% Depth 2 446 of 5705 7.82% Depth 3 58 of 5705 1.02% Depth 4 5 of 5705 0.09%
Utricularia gibba Depth 1 9307 of 14433 64.48% Depth 2 3393 of 14433 23.51% Depth 3 1130 of 14433 7.83% Depth 4 382 of 14433 2.65% Depth 5 134 of 14433 0.93% Depth 6 51 of 14433 0.35% Depth 7 26 of 14433 0.18% Depth 8 6 of 14433 0.04% Depth 9 4 of 14433 0.03%
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Window size: 10
Cutoff: 0.2%
(Two syntenic genes in a span of 10 genes)
http://genomevolution.org/r/4nlz
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Genlisea aurea Depth 1 1436 of 1478 97.16% Depth 2 39 of 1478 2.64% Depth 3 3 of 1478 0.20%
Utricularia gibba Depth 1 3384 of 4215 80.28% Depth 2 651 of 4215 15.44% Depth 3 124 of 4215 2.94% Depth 4 42 of 4215 1.00% Depth 5 9 of 4215 0.21% Depth 6 5 of 4215 0.12%
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Window size: 5
Cutoff: 0.1%
(One syntenic genes in a span of 5 genes)
http://genomevolution.org/r/4nlx
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Genlisea aurea Depth 1 1295 of 1316 98.40% Depth 2 21 of 1316 1.60%
Utricularia gibba Depth 1 2631 of 3158 83.31% Depth 2 460 of 3158 14.57% Depth 3 59 of 3158 1.87% Depth 4 6 of 3158 0.19% Depth 5 2 of 3158 0.06%
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Window size: 20
Cutoff: 0.1%
(two syntenic genes in a span of 20 genes)
http://genomevolution.org/r/4nm1
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Genlisea aurea Depth 1 2732 of 2880 94.86% Depth 2 142 of 2880 4.93% Depth 3 6 of 2880 0.21%
Utricularia gibba Depth 1 7097 of 9850 72.05% Depth 2 1919 of 9850 19.48% Depth 3 569 of 9850 5.78% Depth 4 171 of 9850 1.74% Depth 5 59 of 9850 0.60% Depth 6 20 of 9850 0.20% Depth 7 6 of 9850 0.06% Depth 8 4 of 9850 0.04% Depth 9 2 of 9850 0.02% Depth 10 1 of 9850 0.01% Depth 12 1 of 9850 0.01% Depth 13 1 of 9850 0.01%
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