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Organisms:
1
}
Oryza sativa L. ssp. indica (rice) (id4385)
Organism Information
Name:
Oryza sativa L. ssp. indica (rice)
Description:
Eukaryota
;
Viridiplantae
;
Streptophyta
;
Streptophytina
;
Embryophyta
;
Tracheophyta
;
Euphyllophyta
;
Spermatophyta
;
Magnoliophyta
;
Liliopsida
;
commelinids
;
Poales
;
Poaceae
;
BEP clade
;
Ehrhartoideae
;
Oryzeae
;
Oryza
;
Tools:
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Genomes:
6
Oryza sativa L. ssp. indica (rice) (IR8) (vv20161206, id60182): hard mask
Oryza sativa L. ssp. indica (rice) (R498(ShuHui498)): A high quality reference genome would enable discovery of genome structure and genetic variation. Here we report an integrative method to generate a 390.3-megabase assembly covering over 99% of the indica rice genome Shuhui498 with 7 of the 12 chromosomes (vIGDBV1, id34910): unmasked
Oryza sativa L. ssp. indica (rice) (v20200414, id60056): hard mask
Oryza sativa L. ssp. indica (rice) (v20181025, id60054): hard mask
Oryza sativa L. ssp. indica (rice) (v1.1, id1610): unmasked
Oryza sativa L. ssp. indica (rice) (v1, id1609): unmasked
Genome Information
Name:
IR8
Genome ID:
60182
Sequence type:
hard mask (gstid103)
Owner:
Min-Yu Chiang
Length:
389,088,367 bp
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Datasets:
1
genome.faa(vv20161206, id141526)
Dataset Information
Name:
genome.faa (id141526)
Source:
NCBI (id400)
Version:
v20161206
Organism:
Oryza sativa L. ssp. indica (rice)
Created:
2021-01-13 02:28:40
Chromosomes:
15
Total length:
389,088,367 bp
Tools:
OrganismView
Chromosomes:
CM007596.1 (44,746,683 bp)
CM007597.1 (37,475,564 bp)
CM007598.1 (39,065,119 bp)
CM007599.1 (35,713,470 bp)
CM007600.1 (31,269,760 bp)
CM007601.1 (32,072,649 bp)
CM007602.1 (30,380,234 bp)
CM007603.1 (30,236,384 bp)
CM007604.1 (24,243,884 bp)
CM007605.1 (25,246,678 bp)
CM007606.1 (32,337,678 bp)
CM007607.1 (25,963,606 bp)
MPPV01000064.1 (88,843 bp)
MPPV01000065.1 (149,356 bp)
MPPV01000066.1 (98,459 bp)
Chromosome Information
Chromosome ID:
CM007596.1
Nucleotides:
44,746,683 bp
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