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Organisms:
1
}
Medicago truncatula (id38529)
Organism Information
Name:
Medicago truncatula
Description:
cellular organisms
;
Eukaryota
;
Viridiplantae
;
Streptophyta
;
Streptophytina
;
Embryophyta
;
Tracheophyta
;
Euphyllophyta
;
Spermatophyta
;
Magnoliophyta
;
eudicotyledons
;
core eudicotyledons
;
rosids
;
fabids
;
Fabales
;
Fabaceae
;
Papilionoideae
;
Trifolieae
;
Medicago
;
Medicago truncatula
;
Tools:
OrganismView
 | 
CodeOn
Search:
 
 
Genomes:
48
Medicago truncatula (vMedtr_V4, id58736): cds
Medicago truncatula (Medicago truncatula (medtr.R108_HM340.gnm1)) (vmedtr.R108_HM340.gnm1, id42051): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM324.gnm1)) (vmedtr.HM324.gnm1, id42032): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM185.gnm1)) (vmedtr.HM185.gnm1, id41544): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM129.gnm1)) (vmedtr.HM129.gnm1, id41353): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM125.gnm1)) (vmedtr.HM125.gnm1, id40880): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM095.gnm1)) (vmedtr.HM095.gnm1, id40666): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM060.gnm1)) (vmedtr.HM060.gnm1, id40198): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM058.gnm1)) (vmedtr.HM058.gnm1, id42062): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM056.gnm1)) (vmedtr.HM056.gnm1, id40197): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM050.gnm1)) (vmedtr.HM050.gnm1, id40196): unmasked
Medicago truncatula (Medicago trunculata (medtr.HM034.gnm1)) (vmedtr.HM034.gnm1, id40195): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM026.gnm1)) (vmedtr.HM026.gnm1, id40194): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM023.gnm1)) (vmedtr.HM023.gnm1, id40193): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM022.gnm1)) (vmedtr.HM022.gnm1, id40192): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM020.gnm1)) (vmedtr.HM020.gnm1, id40191): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM018.gnm1)) (vmedtr.HM018.gnm1, id40190): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM017.gnm1)) (vmedtr.HM017.gnm1, id40189): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM010.gnm1)) (vmedtr.HM010.gnm1, id40188): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM006.gnm1)) (vmedtr.HM006.gnm1, id40187): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM005.gnm1) (vmedtr.HM005.gnm1, id40186): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM004.gnm1)) (vmedtr.HM004.gnm1, id40185): unmasked
Medicago truncatula (Medicago truncatula (medtr.HM002.gnm1)) (vmedtr.HM002.gnm1, id40184): unmasked
Medicago truncatula (vmedtr.A17.gnm5, id66490): unmasked
Medicago truncatula (HM340.PBJelly): ALLPATHS+PBJelly scaffolds (vHM340.PBJelly.1, id31054): unmasked
Medicago truncatula (HM340.Alpaca): Alpaca scaffolds (vHM340.Alpaca.1, id30547): unmasked
Medicago truncatula (HM056.PBJelly): ALLPATHS+PBJelly scaffolds (vHM056.PBJelly.1, id31058): unmasked
Medicago truncatula (HM056.Alpaca): Alpaca scaffolds (vHM056.Alpaca.1, id30543): unmasked
Medicago truncatula (HM034.PBJelly): ALLPATHS+PBJelly scaffolds (vHM034.PBJelly.1, id31065): unmasked
Medicago truncatula (HM034.Alpaca): Alpaca scaffolds (vHM034.Alpaca.1, id30539): unmasked
Medicago truncatula (HM056): allpaths scaffolds (v2.0, id25879): unmasked
Medicago truncatula (Medicago truncatula J17): Medicago truncatula cultivar Jemalong A17, whole genome shotgun sequencing project (v2, id60285): whole genome
Medicago truncatula (HM002): allpaths scaffolds (v1.0, id25875): unmasked
Medicago truncatula (HM004): allpaths scaffolds (v1.0, id24521): unmasked
Medicago truncatula (HM010): allpaths scaffolds (v1.0, id24518): unmasked
Medicago truncatula (HM022): allpaths scaffolds (v1.0, id24564): unmasked
Medicago truncatula (HM023): allpaths scaffolds (v1.0, id25876): unmasked
Medicago truncatula (HM034): allpaths scaffolds (v1.0, id24566): unmasked
Medicago truncatula (HM050): allpaths scaffolds (v1.0, id25877): unmasked
Medicago truncatula (HM058): allpaths scaffolds (v1.0, id24562): unmasked
Medicago truncatula (HM060): allpaths scaffolds (v1.0, id24571): unmasked
Medicago truncatula (HM095): allpaths scaffolds (v1.0, id25880): unmasked
Medicago truncatula (HM125): allpaths scaffolds (v1.0, id25881): unmasked
Medicago truncatula (HM129): allpaths scaffolds (v1.0, id25882): unmasked
Medicago truncatula (HM185): allpaths scaffolds (v1.0, id25883): unmasked
Medicago truncatula (HM324): allpaths scaffolds (v1.0, id25884): unmasked
Medicago truncatula (HM340): allpaths scaffolds (v1.0, id33932): unmasked
Medicago truncatula (HM340): R108 allpaths scaffolds (v0.95, id25885): unmasked
Genome Information
Name:
Medicago truncatula (medtr.R108_HM340.gnm1)
Genome ID:
42051
Sequence type:
unmasked: unmasked sequence data (gstid1)
Owner:
Amanda Cooksey
Length:
402,065,285 bp
Tools:
GenomeInfo
 | 
OrganismView
 | 
CodeOn
 | 
SynMap
 | 
CoGeBlast
 | 
Add to GenomeList
Datasets:
2
genome.faa(vmedtr.R108_HM340.gnm1, id118069)
medtr.R108_HM340.gnm1.ann1.85YW.gene_models_main.gff3(vmedtr.R108_HM340.gnm1.ann1, id118070)
Dataset Information
Name:
genome.faa (id118069)
Source:
Legume Federation (id2922)
Version:
medtr.R108_HM340.gnm1
Organism:
Medicago truncatula
Created:
2018-04-20 09:42:29
Chromosomes:
909
Total length:
402,065,285 bp
Tools:
OrganismView
Chromosomes:
medtr.R108_HM340.gnm1.scf000 (32,323,034 bp)
medtr.R108_HM340.gnm1.scf001 (22,153,049 bp)
medtr.R108_HM340.gnm1.scf002 (17,625,802 bp)
medtr.R108_HM340.gnm1.scf003 (16,938,400 bp)
medtr.R108_HM340.gnm1.scf004 (16,869,845 bp)
medtr.R108_HM340.gnm1.scf005 (16,374,477 bp)
medtr.R108_HM340.gnm1.scf006 (15,618,233 bp)
medtr.R108_HM340.gnm1.scf007 (14,838,144 bp)
medtr.R108_HM340.gnm1.scf008 (14,551,806 bp)
medtr.R108_HM340.gnm1.scf009 (14,404,926 bp)
medtr.R108_HM340.gnm1.scf010 (13,930,144 bp)
medtr.R108_HM340.gnm1.scf011 (12,848,239 bp)
medtr.R108_HM340.gnm1.scf012 (12,577,350 bp)
medtr.R108_HM340.gnm1.scf013 (12,275,624 bp)
medtr.R108_HM340.gnm1.scf014 (12,106,518 bp)
medtr.R108_HM340.gnm1.scf015 (11,970,009 bp)
medtr.R108_HM340.gnm1.scf016 (11,285,643 bp)
medtr.R108_HM340.gnm1.scf017 (10,184,104 bp)
medtr.R108_HM340.gnm1.scf018 (9,438,455 bp)
medtr.R108_HM340.gnm1.scf019 (9,198,092 bp)
medtr.R108_HM340.gnm1.scf020 (7,331,699 bp)
medtr.R108_HM340.gnm1.scf021 (6,757,977 bp)
medtr.R108_HM340.gnm1.scf022 (5,705,643 bp)
medtr.R108_HM340.gnm1.scf023 (5,296,096 bp)
medtr.R108_HM340.gnm1.scf024 (5,283,755 bp)
medtr.R108_HM340.gnm1.scf025 (4,997,824 bp)
medtr.R108_HM340.gnm1.scf026 (4,508,906 bp)
medtr.R108_HM340.gnm1.scf027 (3,700,983 bp)
medtr.R108_HM340.gnm1.scf028 (3,678,739 bp)
medtr.R108_HM340.gnm1.scf029 (3,478,130 bp)
medtr.R108_HM340.gnm1.scf030 (3,249,568 bp)
medtr.R108_HM340.gnm1.scf031 (3,026,264 bp)
medtr.R108_HM340.gnm1.scf032 (2,941,662 bp)
medtr.R108_HM340.gnm1.scf033 (2,597,333 bp)
medtr.R108_HM340.gnm1.scf034 (2,396,374 bp)
medtr.R108_HM340.gnm1.scf035 (1,938,539 bp)
medtr.R108_HM340.gnm1.scf036 (1,864,949 bp)
medtr.R108_HM340.gnm1.scf037 (1,785,640 bp)
medtr.R108_HM340.gnm1.scf038 (1,595,434 bp)
medtr.R108_HM340.gnm1.scf039 (1,458,158 bp)
medtr.R108_HM340.gnm1.scf040 (1,442,806 bp)
medtr.R108_HM340.gnm1.scf041 (1,429,513 bp)
medtr.R108_HM340.gnm1.scf042 (1,404,441 bp)
medtr.R108_HM340.gnm1.scf043 (1,370,715 bp)
medtr.R108_HM340.gnm1.scf044 (1,370,323 bp)
medtr.R108_HM340.gnm1.scf045 (1,174,642 bp)
medtr.R108_HM340.gnm1.scf046 (1,153,427 bp)
medtr.R108_HM340.gnm1.scf047 (1,148,738 bp)
medtr.R108_HM340.gnm1.scf048 (1,012,539 bp)
medtr.R108_HM340.gnm1.scf049 (886,974 bp)
Chromosome Information
Chromosome ID:
medtr.R108_HM340.gnm1.scf000
Nucleotides:
32,323,034 bp
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